Gene Patl_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4013 
Symbol 
ID4175797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4830363 
End bp4831019 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID638057044 
Productcarbonate dehydratase 
Protein accessionYP_663566 
Protein GI109900311 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCATG TGATCTCAGG TGTAGCGAAG TTTCAACGTG ATGTTTTTCC AAAAAACAAA 
GAAGTCTTTC AGAAACTAGC GACGAGTCAG AATCCAGAAG TTTTATTCAT TACTTGCTCT 
GATTCACGTA TTGACCCGAA CATGGTCACG CAAACAGGTC CCGGGGATTT ATTTATCTGC 
AGAAATGCGG GTAATGTAGT GCCCCCTCAC AGCAATCAAA CTGGTGGCAT GACCGCCTCA 
ATTGAATTTG CTGTGGCTGC ATTGGGCGTT GAGCATATTG TTATTTGTGG TCACACAGAC 
TGCGGAGCGA TGAAGGGGGC TTTAGCGCCA GAAGCATTAG ATGAATTGCC ACATGTAAAA 
GAATGGTTGG GTCATTGCCG TGGTGCAACT GAAGTCGTTA AACACAAGCA TGGCAGTGTG 
GGCAGTGAGC ATCTCGACGA AGTCACCAAA GAAAACGTCT TGTTGCAGAT ACAACATCTT 
AAGACACACC CCTCTGTTGC AGGGCGACTA GCGTGTAAGG AAGTGCAAAT TCACGGGTGG 
GTCTATAGTA TCGAAACGGG AGAAGTCCTC TGTTACGACA ATAAATCAGA AAGCTTCAAG 
CCTATGGTTG AATGTTACGC TAGCGAAACA GCGTTTAAAT CGGCCATTGG TCTTTAG
 
Protein sequence
MDHVISGVAK FQRDVFPKNK EVFQKLATSQ NPEVLFITCS DSRIDPNMVT QTGPGDLFIC 
RNAGNVVPPH SNQTGGMTAS IEFAVAALGV EHIVICGHTD CGAMKGALAP EALDELPHVK 
EWLGHCRGAT EVVKHKHGSV GSEHLDEVTK ENVLLQIQHL KTHPSVAGRL ACKEVQIHGW 
VYSIETGEVL CYDNKSESFK PMVECYASET AFKSAIGL