| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3988 |
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| Symbol | |
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| ID | 4175768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4799610 |
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| End bp | 4801208 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057016 |
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| Product | AbgT putative transporter |
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| Protein accession | YP_663542 |
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| Protein GI | 109900287 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
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| TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.025023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAAGACG CTAACGATCA GAAAAAACAA ACAAGCCAAG AGAACCCGAC AGGGTGGTTT
TCGAGGTTTC TCGCAACAGT GGAATGGCTT GGAAATCTAC TACCACACCC TATTACATTG
TTCGCTTTAC TTGCTACAGC GATTGTCATT ATCAGTGGTG TTTTAGGCTA CTTTGACGTC
AGTGTAGTCG ACCCTCGCCC GCTTGATGCG AAAGGGCGTG CACCGGATGG CATGATACAA
GTGGTATCGC TGCTTAACGC AGAAGGTTTG CAAAGAATAG TCACTCATTT AGTCACCAAC
TTCACAGGCT TTGCCCCGTT AGGAACGGTG TTAGTGGCCT TGCTAGGGGT GTCGGTTGCT
GAACATTCAG GCTTATTGTC AACCGCAATG CGTGCCATGG TCATGAATGC CTCTAAGCGC
ATGGTAACCG TGGTTATTGT ACTGGCGGGT ATTTTGTCAA ACACGGCTTC AGAGTTGGGT
TATGTGGTGT TGATACCGCT GGCGGCAATG ATATTTCATT CTTTGGGGCG TCACCCTCTT
GCTGGTCTTG CGGCTGCATT TGCTGGTGTG TCTGGTGGTT ATAGCGCCAA TCTATTGCTC
GGTACGGTCG ACCCCCTCTT GTCAGGTATC ACTGAAGCGG CAGCCCATAT GATTGATCAA
GATTATGTGG TGGGCCCAGA AGTGAATTGG TACTTTATGT TTATCAGTAC TTTCTTAGTG
GCGGGCCTAG GGGCATTTGT AACGGAGAAA ATCGTAGAGC CGCGTTTAGG CCAGTACGAC
CCAAGTGAAG CCTCAATCGA GTTGGGCAAA CAAGAAATGA GTGCACCAAC AGCCTTAGAG
AAAAAAGCGT TGCGCTGGGC AGGTGTAAGT TTTGCGCTAC TGTGTGGTGT GTTGGCGCTG
ACCATAGTTC CAGAAAATGG CATTTTAAGA CACCCTGAAA CTGGTGCCGT TGCTGGCTCG
CCATTTTTAA AAGGGATTGT TGCTTTTATT TTTATTACCT TTGCTGTGCC TGGATTCGTG
TATGGGAAAA TCGCTGGTAC CATGAATAAT GATAAAGACG TCATCAATGC GATGTCTAAA
AGTATGGGAG CGATGGGGCT ATACATCACC TTAGTATTTT TTGCCGCGCA GTTTGTGGCT
TTCTTCAATT GGACAAATTT GGGGACTGTA CTTGCCGTCA AAGGTGCTGA GTTAATTCAA
ACGATTGGTC TTGACGGCCC TGGCGTATTT ATCTTCTTTA TATTGATGTG TGGCATGGTG
AACTTGTCCC TTGGCAGTGC TTCGGCCCAA TGGGCGGTTA CTGCTCCTAT TTTCGTTCCC
ATGTTGATGC TGGTGGGTTT TGCTCCAGAG GTAATTCAAG CGGCGTACCG GATAGGAGAT
TCAGTGACGA ATGTGATTTC ACCCATGATG AGTTACTTTG GGTTGATATT AGCTATCGCC
GCGCAGTATA AAAAAGACTT AGGCATGGGT ACGTTAATTG CCACCATGTT GCCTTACAGT
CTTGTATTCA TGGTGGGTTG GACCTTGTTA TTTTATGTGT GGGTATTTCT TTTAGGCATG
CCGGTAGGGC CTGGGGCAGA GACTTATTAC ACTGGGTAA
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| Protein sequence | MQDANDQKKQ TSQENPTGWF SRFLATVEWL GNLLPHPITL FALLATAIVI ISGVLGYFDV
SVVDPRPLDA KGRAPDGMIQ VVSLLNAEGL QRIVTHLVTN FTGFAPLGTV LVALLGVSVA
EHSGLLSTAM RAMVMNASKR MVTVVIVLAG ILSNTASELG YVVLIPLAAM IFHSLGRHPL
AGLAAAFAGV SGGYSANLLL GTVDPLLSGI TEAAAHMIDQ DYVVGPEVNW YFMFISTFLV
AGLGAFVTEK IVEPRLGQYD PSEASIELGK QEMSAPTALE KKALRWAGVS FALLCGVLAL
TIVPENGILR HPETGAVAGS PFLKGIVAFI FITFAVPGFV YGKIAGTMNN DKDVINAMSK
SMGAMGLYIT LVFFAAQFVA FFNWTNLGTV LAVKGAELIQ TIGLDGPGVF IFFILMCGMV
NLSLGSASAQ WAVTAPIFVP MLMLVGFAPE VIQAAYRIGD SVTNVISPMM SYFGLILAIA
AQYKKDLGMG TLIATMLPYS LVFMVGWTLL FYVWVFLLGM PVGPGAETYY TG
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