Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3976 |
Symbol | |
ID | 4175756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4787142 |
End bp | 4789061 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638057004 |
Product | DNA mismatch repair protein MutL |
Protein accession | YP_663530 |
Protein GI | 109900275 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCAGCCA CCAGTGCAAC GATACGTATT TTACCCGCTC AACTTGCTAA CCAAATCGCC GCAGGTGAAG TGGTGGAAAG ACCTGCGTCT GTTGTTAAAG AGTTAGTCGA AAACAGTCTC GACTCTGGGG CCAGTCAAAT TGATATCGAA ATAGACAAAG GTGGGCATAA ACGCATTTGT ATTCGCGACA ATGGCGGTGG TATCGAAAAA GACCAGCTGG CACTTGCTTT AAGTCGCCAC GCCACCAGTA AAATTAGCTC CCTAGACGAC TTAGAGCACA TTCACAGTTT GGGCTTTCGC GGAGAAGCTT TAGCCAGTAT TAGCTCAGTG GCACGCTTAA CATTGACCTC AAAACCCATA AATCAGCCAC AGGCATGGCA AGCCCACGCA GAAGGACGCG ACATGCAGGT ACAATTAAAC CCTGTGGCTC ATCCTGATGG CAGCAGTGTT GAGGTGATTG ATTTATTCTT TAACACCCCT GCTCGGCGTA AATTTTTACG GGCTGAAAAA ACTGAGTTCA ATCATATTGA TGAAGTCATC AGGCGTATTT CGTTAAGTCG CTTCGATGTG AGCTTTAGCT TAAAGCACAA TGGTAAATTA CTGCGCAAAT ACCCTGCGCT TACTGAGCAA ACCGATCACC TTAAACGCTT AGGGGCGATT TGTAATAAGG ATTTTGCCAA TACGGCCATC GCTTTAGACA GCCACTATCA AGATATGGAA TTAATCGGCT GGATAACCCC GCCTGATGCA ACGACCCAGC AATCCGATGT GCAGTATTTC TACGTAAACG GTCGCATGAT GCGCGATAAG TTGATTAACC ACGCCATTCG CCAAGCGTTT GAAGGCGTTA TCAGCCCTGA TTCATCGCCA AATTACGTGC TGTACTTAAA CATTGCGCAC CACGAAGTGG ATGTAAATGT GCACCCAGCC AAACATGAAG TACGCTTTCA TCAAGCTCGT TTAGTCCATG ATTTTATCTT TCGTGCGCTT GCTGATGGCA TCCATCAATA CTTTAGCAAC ACACCAGCGC AATCTGGGCC CAGCCAGTTG GCAGAGGTGG CGCTGCAACA CGACTACATT GCCCCTCTTC AATCGGCCCA GCAATCATCT ACCGGTGTTG CTGAAGGGGA GCCAGCTTCC CAGATGCATT CTTCATCGCC AGATTATTCG TCGGCCCTAA GTAGCGAGTC ATTAACCTCT GACAACCACC CACTCAACAA TACAGCTGGG CGCGTTCAAG CTCCTGGCTC TGGCTCTGGC TCTGGCTCTG GCTCTGGCTC TGGCTCTGGC TCTGGCTCTG GCAATAGTTT ATCGGCACAG GCGGTAAAAG GTTACCAACA ACTCATGAGC GCCCAGCATG TGCTTAACAG TGACGTGACA CACTCCGCCC AGAATGAGCA CTTATGCGTG CCGGTGGACG AAGAAAGACT ATTGGTGCTG TTTGAAGCTC AGCACTATGT GTTAACTATC CGTGCCCTTG TGGCGGCGCA TATCAGTACC ACCTTTGATA CAGATAACTG TGTGTCACAA CCATTGCTGA TGCCAGTTTC AATTGTCGCT GACCAGCCCG CGCTTCAGCG AGCACAAGCC ATGTATGAAG CGCTACTGAA TAACCGTGTA GAAATCGGTT GGAGTCAAAA GCGCGTTATC TTGAAAAAGG TACCATCTGG TATGCGCCAT CTACCTTGGG CAAACATACT GCCCGAGTTA CTTGATAACG CCGTTTCAGG TGAAAACGAG GTTAAAACAC ATTTATTTAA TTGCATCGCA TTGCATTCAC CAAAACTTAC CCCACTTCAG ATTCATGAAA CGTGGACAGC ACTCATTGCT TACCCACGTA CGTTTGAAAC TTTGATGAAT ACAGCGGTGT TATTACCGCT GGCAACTTTA GTAAGCGCCC ATATTGAATC AACACACTGA
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Protein sequence | MSATSATIRI LPAQLANQIA AGEVVERPAS VVKELVENSL DSGASQIDIE IDKGGHKRIC IRDNGGGIEK DQLALALSRH ATSKISSLDD LEHIHSLGFR GEALASISSV ARLTLTSKPI NQPQAWQAHA EGRDMQVQLN PVAHPDGSSV EVIDLFFNTP ARRKFLRAEK TEFNHIDEVI RRISLSRFDV SFSLKHNGKL LRKYPALTEQ TDHLKRLGAI CNKDFANTAI ALDSHYQDME LIGWITPPDA TTQQSDVQYF YVNGRMMRDK LINHAIRQAF EGVISPDSSP NYVLYLNIAH HEVDVNVHPA KHEVRFHQAR LVHDFIFRAL ADGIHQYFSN TPAQSGPSQL AEVALQHDYI APLQSAQQSS TGVAEGEPAS QMHSSSPDYS SALSSESLTS DNHPLNNTAG RVQAPGSGSG SGSGSGSGSG SGSGNSLSAQ AVKGYQQLMS AQHVLNSDVT HSAQNEHLCV PVDEERLLVL FEAQHYVLTI RALVAAHIST TFDTDNCVSQ PLLMPVSIVA DQPALQRAQA MYEALLNNRV EIGWSQKRVI LKKVPSGMRH LPWANILPEL LDNAVSGENE VKTHLFNCIA LHSPKLTPLQ IHETWTALIA YPRTFETLMN TAVLLPLATL VSAHIESTH
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