| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3964 |
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| Symbol | |
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| ID | 4175744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4774574 |
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| End bp | 4775626 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056992 |
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| Product | peptidyl-arginine deiminase |
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| Protein accession | YP_663518 |
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| Protein GI | 109900263 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.582867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTAC TCCCTGAATG GGCGCCTCAA GAAGCCATTA TTCTTGCGTG GCCTGACCAA
GAAACAGACT GGCAACCTTG GCTTGTAGAC GTTCGCCAAG TCTATTTGAC GATTATGGCT
AACCTTAACC AAGCTGGTAC TGGTGTCATA CTGCTTATTC GCGACCAAGA AATCCCTGCC
TTTAAAACCT TGAGCCAAGA TTTTAAACAG CCCATTGATC GCGTGCTATT AGTACACGCC
GATTATAACG ACACTTGGGT ACGAGATTAT GGCTTTTTAA CCTGCCATAG TTCAGGTGGC
ATGCAGCCTA TCGAGTTTAA CTTTAACGGC TGGGGCAATA AATTCGACGC TAACAAAGAC
AATCAGATAA ACCAGCAAGT ATTAGCAGGC TTATGCCGTT TACCGTTGCA GAGTTTCGAT
ATTGTCGCTG AAGGCGGTGC GCTAGAAATA GACGATGCAG GTGTGTTGCT CTCTACTGAG
TTTTGTTTAT CGAACCCTGA GCGTAATGGT GACATGACGA TGTCTCAATA TCGCGGGGCA
TTCAAAGTCG CTTTAGGCGC TAAGAGTGTG CATATATTCC AACAAGGGCA TTTAGAAGGT
GATGACACAG ACGGCCACAT TGACACCCTA GTTCGGTTTA CCCCTCACGA TGGCCTAGTC
GTGCAGTCAG CATTTAATGT ACCCGATGAC ACTCACTATG CCGGCTTAGC AGCCCTGGTC
GACGAGTGCA AAGCTGCTAT GCCCAAACAT CAAATCTTCG AACTTCCCTT GCCCCAAGTG
TTTAACCAGC AAGGCGAACG CTTGCCTGCT TCTTATGCCA ACTACTTGAT AAATAATAAA
CAGATCTTAT GTCCTGTATA TCAGCAGCCA CAAGATCAAC TTGCCATGGA TATAATGGCA
AAGGCTTATC CTGAACATAC AATCGTGCCA ATAAATTGCT TACCTTTGGT TCAGCAATTC
GGCAGCTTGC ATTGTATTAG TATGCAAGTT CCGGTGAGTA CATTAACGTT CGACATTAGC
AAGAAACTAG CAACAGGAGT CAGTCAGTTA TGA
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| Protein sequence | MRLLPEWAPQ EAIILAWPDQ ETDWQPWLVD VRQVYLTIMA NLNQAGTGVI LLIRDQEIPA
FKTLSQDFKQ PIDRVLLVHA DYNDTWVRDY GFLTCHSSGG MQPIEFNFNG WGNKFDANKD
NQINQQVLAG LCRLPLQSFD IVAEGGALEI DDAGVLLSTE FCLSNPERNG DMTMSQYRGA
FKVALGAKSV HIFQQGHLEG DDTDGHIDTL VRFTPHDGLV VQSAFNVPDD THYAGLAALV
DECKAAMPKH QIFELPLPQV FNQQGERLPA SYANYLINNK QILCPVYQQP QDQLAMDIMA
KAYPEHTIVP INCLPLVQQF GSLHCISMQV PVSTLTFDIS KKLATGVSQL
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