| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3937 |
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| Symbol | |
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| ID | 4175717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4748799 |
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| End bp | 4749248 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056965 |
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| Product | TraR/DksA family transcriptional regulator |
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| Protein accession | YP_663491 |
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| Protein GI | 109900236 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000139541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACAG GAAATACGAA TAAAACACTC GGATTATTAG CCCTAGCTGG TCTTACTCCC
TATCAGGAGA AAGCAGGCGA GGAATACATG AATGAAAAAC AAATGGAGCA TTTCCGTTTG
TTGCTAAAAG CATGGCGCGA CCAATTACGC CAAGAAGTAG ATCGTACCGT GCATCATATG
CAAGACGAAG CGGCTAACTT CCCTGACCCA GTCGATCGGG CAGCACAGGA AGAAGAGTTC
AGTATTGAAC TTAGAACCCG TGACCGTGAG CGCAAATTGA TCAAAAAAAT CGAGAAAACC
CTTAAGCGTA TCGAAGAAGA CGATTTTGGC TTCTGTGATA CCTGTGGTAT CGAAATTGGT
GTTAGGCGTT TAGAAGCCCG TCCTACCGCT GATATGTGTA TCGATTGTAA GACCCTAGCT
GAAATTAAAG AAAAGCAGCT ACAAGGTTAA
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| Protein sequence | MPTGNTNKTL GLLALAGLTP YQEKAGEEYM NEKQMEHFRL LLKAWRDQLR QEVDRTVHHM
QDEAANFPDP VDRAAQEEEF SIELRTRDRE RKLIKKIEKT LKRIEEDDFG FCDTCGIEIG
VRRLEARPTA DMCIDCKTLA EIKEKQLQG
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