Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3936 |
Symbol | |
ID | 4175716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4747817 |
End bp | 4748734 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056964 |
Product | glutamate--tRNA ligase |
Protein accession | YP_663490 |
Protein GI | 109900235 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000130965 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAC CTTTCGTTGC ACAGCGCCTT AATCAAGATA CCTCTTATGT AGGTCGGTTT GCGCCATCCC CCTCTGGACC ATTGCATTTA GGTTCCCTCG TGGCTGCTTT AGGCAGTTAT ATACGTGCGC GGCAAATGGA CGGGAAATGG TTGTTACGCA TAGAAGATAT TGATCCCCCA CGAGCGCTCG CTGGTGCAGA TGATCTTATA AAAGAGTCAC TCGTTCGTCA CGGGTTGTTA TGGGACGACG AAGTGACTTA TCAACATGAC AGTCACGAAC GATATGAGCA AGCACTGAAT TGGCTGCAGG CAAATGGTCA TAGTTATTGT TGCCAATGTA ATAGAAAGCA ACGACTTGCC AACCCTAAAG GGCAATCTTG CCCCTGCGCG CAGTTAGCCT TGGCAAAAGA TGAATGTGCC ACTGTCCTGA GGAATACCTT GGGGGGGCAG CATATTCAAG ATTTAGCATT AGGGGCGGTT TCGTTTGCAA AAGGTGCCTG TGATGATTTT ATCTTGCGCC GTAAAGATGG GTTATATGCC TATCAACTAG CTGTGGTCGT GGATGATATA TACGCTGGTG TGACCGAAGT AGTGCGAGGT GCAGATATTC TGCCCTCTAC CGCATATCAG CTAGCTTTAT ATCAACTGTT TGACCAACCA CCCCCCGTAT ACCTGCATTT ACCACTTGTG ATGGGAGATA ACGGTCAAAA ACTGAGTAAG CAAAACCATG CCCCAGGGTT AAATGATGCT GTTGCCAATA GCAATTTATG CAGGGCTCTT GAGGTCTTAG GTTTGCCGGT TCCTAGGGCG CTGAATAATG CCACGGTGAA CGATATTTTA GAATTCGCAC TGAACAACTG GCACATAGCA CTTATCGCAA ACGATGCGAG TGCGTTTGAC AATAGAATTG ACGCGTAA
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Protein sequence | MNLPFVAQRL NQDTSYVGRF APSPSGPLHL GSLVAALGSY IRARQMDGKW LLRIEDIDPP RALAGADDLI KESLVRHGLL WDDEVTYQHD SHERYEQALN WLQANGHSYC CQCNRKQRLA NPKGQSCPCA QLALAKDECA TVLRNTLGGQ HIQDLALGAV SFAKGACDDF ILRRKDGLYA YQLAVVVDDI YAGVTEVVRG ADILPSTAYQ LALYQLFDQP PPVYLHLPLV MGDNGQKLSK QNHAPGLNDA VANSNLCRAL EVLGLPVPRA LNNATVNDIL EFALNNWHIA LIANDASAFD NRIDA
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