Gene Patl_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3936 
Symbol 
ID4175716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4747817 
End bp4748734 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content47% 
IMG OID638056964 
Productglutamate--tRNA ligase 
Protein accessionYP_663490 
Protein GI109900235 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000130965 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAC CTTTCGTTGC ACAGCGCCTT AATCAAGATA CCTCTTATGT AGGTCGGTTT 
GCGCCATCCC CCTCTGGACC ATTGCATTTA GGTTCCCTCG TGGCTGCTTT AGGCAGTTAT
ATACGTGCGC GGCAAATGGA CGGGAAATGG TTGTTACGCA TAGAAGATAT TGATCCCCCA
CGAGCGCTCG CTGGTGCAGA TGATCTTATA AAAGAGTCAC TCGTTCGTCA CGGGTTGTTA
TGGGACGACG AAGTGACTTA TCAACATGAC AGTCACGAAC GATATGAGCA AGCACTGAAT
TGGCTGCAGG CAAATGGTCA TAGTTATTGT TGCCAATGTA ATAGAAAGCA ACGACTTGCC
AACCCTAAAG GGCAATCTTG CCCCTGCGCG CAGTTAGCCT TGGCAAAAGA TGAATGTGCC
ACTGTCCTGA GGAATACCTT GGGGGGGCAG CATATTCAAG ATTTAGCATT AGGGGCGGTT
TCGTTTGCAA AAGGTGCCTG TGATGATTTT ATCTTGCGCC GTAAAGATGG GTTATATGCC
TATCAACTAG CTGTGGTCGT GGATGATATA TACGCTGGTG TGACCGAAGT AGTGCGAGGT
GCAGATATTC TGCCCTCTAC CGCATATCAG CTAGCTTTAT ATCAACTGTT TGACCAACCA
CCCCCCGTAT ACCTGCATTT ACCACTTGTG ATGGGAGATA ACGGTCAAAA ACTGAGTAAG
CAAAACCATG CCCCAGGGTT AAATGATGCT GTTGCCAATA GCAATTTATG CAGGGCTCTT
GAGGTCTTAG GTTTGCCGGT TCCTAGGGCG CTGAATAATG CCACGGTGAA CGATATTTTA
GAATTCGCAC TGAACAACTG GCACATAGCA CTTATCGCAA ACGATGCGAG TGCGTTTGAC
AATAGAATTG ACGCGTAA
 
Protein sequence
MNLPFVAQRL NQDTSYVGRF APSPSGPLHL GSLVAALGSY IRARQMDGKW LLRIEDIDPP 
RALAGADDLI KESLVRHGLL WDDEVTYQHD SHERYEQALN WLQANGHSYC CQCNRKQRLA
NPKGQSCPCA QLALAKDECA TVLRNTLGGQ HIQDLALGAV SFAKGACDDF ILRRKDGLYA
YQLAVVVDDI YAGVTEVVRG ADILPSTAYQ LALYQLFDQP PPVYLHLPLV MGDNGQKLSK
QNHAPGLNDA VANSNLCRAL EVLGLPVPRA LNNATVNDIL EFALNNWHIA LIANDASAFD
NRIDA