| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3912 |
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| Symbol | |
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| ID | 4175692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4717545 |
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| End bp | 4719191 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056940 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_663466 |
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| Protein GI | 109900211 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000271467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATT TTGATCTCTA TGCGACTCAC ACGGTTGAAA ACCAGCCTCA GGTACTTTCA
CCTTATAATC TTTGGTCTGC TGATCGAATG TTGATGCATG CGGTGCAGCA GAACCACAGT
GACTTACCTA CAAGTACATT ATCGGATTTT GGCAATATTG CCGGTGACCA GCTCATGAAT
GCTGGCGAGT TAGCCAATAA AAACAAACCA CAATTTCAGC CATTCGATGG CTATGGGCGC
AGAATTGACA ACGTTGAGTT TCACCCGGCT TATCACGAAT TAATGGGCGA GGCGATGGCT
GCCCAAGTAC ATGCTTATTC ATGGAAAAAC GAATCTACAT CAGGTTCACA TGTGATTAGG
GCTGCTTTGC TATTTATGCA CAGCCAAGCG GATGCGGGGA CTACTTGCCC ACTGACCATG
ACACATGCAG GTGTGGCTGC CCTTAAAAAT GCGCCGGATT TGCCACGCTA CTGGACAGAT
AAAGTCATCA GTGGCGAATA TGACCCTCGC TCAATACCAG CAAGTCAAAA GCGTGGTATC
ACCTTGGGCA TGGGTATGAC AGAAAAACAA GGCGGCTCTG ATGTACGGCG TAATACCACT
CGCGCAGACA TTCAAGCTGA CGGAAGCTAC CGAATCACTG GGCATAAGTT TTTCTTTTCG
GCGCCCATGT GCGATGCCCA CCTAATTTTA GCGCAGAGTA CAAAAGGCTT AAGTTGCTTT
CTGCTACCTC GCATTTTAGA AGACGGCTCG CTAAATCACG TCAGAATTCA GCGTTTAAAG
GACAAATTAG GGGATTGGAG TAATGCTTCC TCAGAGGTCG AGTTTCAAGG TGCCACTGCC
TATCTAGTAG GGGAAGAAGG CCGAGGCGTG CCCGTTATTA TTGATATGGT ATCCCTTACT
CGCCTCGACT GCATGATTGG CTCAACGTCT TTAATGCGCC AAGCATTAGT GCAAGCGCTG
CATCATACTC AGCACCGAGA GGCCTTTGGC GCAAAACTTA TAGACCAACC ATTGATGAAA
AACGTACTGG CGGATTTGAC CTTAGAAGTC GCCGCCAGTT TAGCCTTAAC CATGCGCGTT
GCTCGCGCCG TTGATTTGGC TAACACCAAT CAGCACGAGG CGCACCTTTC ACGCATTGCC
ACTGCCATTG GAAAATATTG GATCTGCAAA CGTACTCCCG CCTTTGTAAA TGAAGCGCAA
GAATGTTTAG GCGGTATTGG CTATGTGGAA GAAAACATTC TGCCGCGTTT ATATCGCCAA
GCGCCGTTGA ACTCGATATG GGAGGGCAGC GCCAATGTAC AATGTCTCGA TGTGCTTCGG
GCGCTACGCA AAGAGCCTGA GGCCATTAAT GCGCTGTTTG CAGAGTTGCA AAGGGCCGCG
GGCAAAAATA ACGCTTATGA TTGCCATCTC AAAACCCTTA AAGCAGCCTT CGATGATCAA
GACACCCTTG AAATACGCAG TCGTTTGGTG GTGGAACAAA TGGCACTTGC ACTGCAAGGT
GCCTTGCTTT TAACTGCGAA TGACAAAGAC ATGGCTGAGG CATTTTGCTC AGCGCGATTG
GACAAACAGC AGGGACTAGC ATTCGGTACG CTTCCCGCTA GCGTGCCTTT TGATGAAATC
ATACAGCGGG GCATTCTCGA AAATTAA
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| Protein sequence | MSDFDLYATH TVENQPQVLS PYNLWSADRM LMHAVQQNHS DLPTSTLSDF GNIAGDQLMN
AGELANKNKP QFQPFDGYGR RIDNVEFHPA YHELMGEAMA AQVHAYSWKN ESTSGSHVIR
AALLFMHSQA DAGTTCPLTM THAGVAALKN APDLPRYWTD KVISGEYDPR SIPASQKRGI
TLGMGMTEKQ GGSDVRRNTT RADIQADGSY RITGHKFFFS APMCDAHLIL AQSTKGLSCF
LLPRILEDGS LNHVRIQRLK DKLGDWSNAS SEVEFQGATA YLVGEEGRGV PVIIDMVSLT
RLDCMIGSTS LMRQALVQAL HHTQHREAFG AKLIDQPLMK NVLADLTLEV AASLALTMRV
ARAVDLANTN QHEAHLSRIA TAIGKYWICK RTPAFVNEAQ ECLGGIGYVE ENILPRLYRQ
APLNSIWEGS ANVQCLDVLR ALRKEPEAIN ALFAELQRAA GKNNAYDCHL KTLKAAFDDQ
DTLEIRSRLV VEQMALALQG ALLLTANDKD MAEAFCSARL DKQQGLAFGT LPASVPFDEI
IQRGILEN
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