| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3907 |
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| Symbol | |
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| ID | 4175687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4712685 |
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| End bp | 4714154 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638056935 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_663461 |
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| Protein GI | 109900206 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATA TGCCCATATT TGAATCAATA TACGTTAATC CATCCCGTCG TGATTTGTTG
AAAAAGCTAG TAGCGTTAGG CGTGACTTCC CTTGCCGTTT CGCCATTAGC ATATTCACGT
AGCTTAGCTA ACTCTGAAAG TAGAATAATA TACCGTGACG ACCCAGATTA TGATGATTGG
CGGCGCTCCA TGTTATGGAA GTCAAACGCT CCAGATCGAT ATCCTGACGT CATTATCCAA
GCTAAATCCG AGCAGGAAAT TACTCAAGCA CTGAAGTTTG CTCAAAAGAA CGATTTACAA
GTTGTATGCC GTACAAGTGG TCATAATGCT TCTTCCTCTG TATTACGTAA TGGGGGAATG
TTATTAGACA TATCCGCTTT AAATGAACTA ACAGTAGATG CCCAACATAA ATTCGCTTAC
GTACAGCCTA GCGTTAAAAT GATCCACTTA AATGAAGAAC TGAGAAAGCA TGGATTAGAC
TTCCCCACTG CTAGCTGCCA AACAGTGTCA TTGGGGGGTT ACCTTCTTGG CGGAGGGATA
GGTGCAAATA CCAGATACTG GGCTAAAGGC CCTGCATGCT ATTCCATAAT AAGTGCAGAT
GTCATTTTAG CCGATGGTAA GAAGATCACC GCGAGTAAAG AGCAAAATGA GGATATTTAT
TGGGCGATTA GAGGAATTGG TCCGGGTTTT TTTGGCATAG TCACGCGCTT TAAGCTTCAG
GTATTTCCAA GCATTAAAGC CATACTTAAA AACACTTACT CATATCCGAT TGATCAATTA
CCCAAAGTAA TTAAATCATT AGATAGATTC TCAAAACAGC ACACTCAAGA CGAGCGCGTC
TCAGTGGGGA TATCTGTGCA CAATCACCCT AGTATTGCGG GAGAAATGAT AGTCAAATTA
GGCGTAACAG CCTTCATTGA CAATGCACAA GATCCTACAG CAACCGCTAA GGCATTACTT
GCCCCTTATG CTAAAAGTAC ATTTGCAGGG GATGCGTTTG ATAAATCTGA AAACGTACAT
GTTCAGATTG AAAAGATGAA ATTTAGCACC AATCCCGCTG ACCGCTCAAA CCAAGACAAT
TTCACGACCG ACAATGCCCA CGCATTCGTC GCTATTGCAA AACTGTTTAA AGATCGACCT
ACCCCTGGTT TTTTGATTTT AGATTTGTCC TACAACAGTT TTAATCATGA GCGACTCAAA
GATGCCAGCT ACTCAGCTTT AGGCAAACAC AAAATTTCGG CAATTATGCA TTGGAAAAAC
GCAGCAGATG ATCCTGTAGC AACAAAATGG TTTGCTCGTT TCAATGCACT AATGCAGCCC
TATGCTAATA GCCATTATAT AAATGAAGTT AATCATGAGT TCCCTGAACG AGTTAAAAAT
AGTTTCACTT CAGAGAAGTG GGAGTACATA TCGATGTTAC GTAATAAGTA CGACCCTAAT
AAACGCTTCC ATACGTACTT AGCATATTAA
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| Protein sequence | MKNMPIFESI YVNPSRRDLL KKLVALGVTS LAVSPLAYSR SLANSESRII YRDDPDYDDW
RRSMLWKSNA PDRYPDVIIQ AKSEQEITQA LKFAQKNDLQ VVCRTSGHNA SSSVLRNGGM
LLDISALNEL TVDAQHKFAY VQPSVKMIHL NEELRKHGLD FPTASCQTVS LGGYLLGGGI
GANTRYWAKG PACYSIISAD VILADGKKIT ASKEQNEDIY WAIRGIGPGF FGIVTRFKLQ
VFPSIKAILK NTYSYPIDQL PKVIKSLDRF SKQHTQDERV SVGISVHNHP SIAGEMIVKL
GVTAFIDNAQ DPTATAKALL APYAKSTFAG DAFDKSENVH VQIEKMKFST NPADRSNQDN
FTTDNAHAFV AIAKLFKDRP TPGFLILDLS YNSFNHERLK DASYSALGKH KISAIMHWKN
AADDPVATKW FARFNALMQP YANSHYINEV NHEFPERVKN SFTSEKWEYI SMLRNKYDPN
KRFHTYLAY
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