Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3903 |
Symbol | |
ID | 4175683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4705190 |
End bp | 4706650 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638056931 |
Product | sulfatase |
Protein accession | YP_663457 |
Protein GI | 109900202 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTGT TTAAGTATAT TTTTATCTCA GTGTTATTTT TCTTGGCAAC TCAGGTGCAA GCTGCACAAG AAAAGAGCAA GCCAAATATC ATCGTAATTA TGACCGATGA CCAAGGGCAA TGGACCTTGG GAGCTTATGA AAAACATATG AAAACGCCGA ACATTGATTA TTTGGCCGAT CAAGGCGTCT TGTTTAACAA TGCAATGACA TCCGCGCCAG TTTGTTCCGC GGCAAGAGCG AGTTTCCATA CGGGAAAAAT GCCCTCTCAA CACGGAGTAT ATGATTTTTT ATCTGAAGGA AACGGTTTTG ATGACAAATG GTTGCAGGGA GAGACTTTCT TAGGTGAACG TATGCAACAA AGTGGTTATC GAACCGGGCT TTTTGGAAAA TGGCATGTAA AGGAGCCGAG CCTCGAACCA GCAGGTGGTT TTGATAGATG GATAAGCCAT GATGCGTTCA AGGCGGGTTG GAGAAATCAG TATCAGCATC GCGGTAAAGT TGCTTTTTCT AAAGATGGTG AAGCCTTCGA GCATACGGGA GTCCAAGCTA GATTTTTAAC CGAAAAAGCG ATTGAGTTTA TTGACGAAAG TACAGACAAA CCGTTTTTTA TAAATATTAA TTATGTGGAG CCACACTTCC CTTTTGAAGG ACTACCAGAA CGTTTAGTTA GTCAGTATCG TCCTGTGGCA CGAAAACTAC TGCGGGATGG GGGGAACTCG TCTTTAGCAT TGGCAAGTAA AGATACCGCG GTGCCTAAAG ATCATGAAGA AAAACTATCT CAGTATTTGG CGGCCATTAG CCTGATTGAT GACCAAGTAG GACAAATCAT GGATGCGTTA GAAGGCCGTG GGCTGCTTGA CAATACGATC ATCGCTTTTG TGTCGGATCA TGGAATGCTG ATGGGGCAAT ATGGTTTGTA TGGAAAAACC AATGCATCGT TTCCGTATAA TTTTTATGAA GAAACAGTCC GAATACCATT CATTATTTAT GGACCAAAAT CTCTTGTTCA AGGCAGACAA TCCAGAGATG AATTCGTAGA TTTACTTGAT TTACACAATA CCATTTTAGA TTTCGCTGGC GACAAAACAT TTACTGAACA GGACGGGCCT GGACGCACTA TTCGACCTCT TTTGAATGCG GAACGTGTTC AAGATTGGAA ACGTTACCAA ATTGCAGAAC GTGGCAATGG TCGAATGATT ACCGATGGAA AATGGAAGTT AGTGCGGTAT TACAAAAAGG ATGGGCAGCC AATAGATTAT TGGTACGACT TGACTCATCC AATGAAAGAG CGTTACCTCG CTGAGCCCCC ACGCTCAGCA GTAAAAACGA AAATGGTTGC AGCTTTAGAT GAGTTTTTCG CGATATACGA AACTCCAGAA CACTCAGGTA AAGATATTTG GCACCAACCT CGGCCAAACT TCAATAGTGA AAAATTACTG AATAAACCTT TGTGGCAATA A
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Protein sequence | MILFKYIFIS VLFFLATQVQ AAQEKSKPNI IVIMTDDQGQ WTLGAYEKHM KTPNIDYLAD QGVLFNNAMT SAPVCSAARA SFHTGKMPSQ HGVYDFLSEG NGFDDKWLQG ETFLGERMQQ SGYRTGLFGK WHVKEPSLEP AGGFDRWISH DAFKAGWRNQ YQHRGKVAFS KDGEAFEHTG VQARFLTEKA IEFIDESTDK PFFININYVE PHFPFEGLPE RLVSQYRPVA RKLLRDGGNS SLALASKDTA VPKDHEEKLS QYLAAISLID DQVGQIMDAL EGRGLLDNTI IAFVSDHGML MGQYGLYGKT NASFPYNFYE ETVRIPFIIY GPKSLVQGRQ SRDEFVDLLD LHNTILDFAG DKTFTEQDGP GRTIRPLLNA ERVQDWKRYQ IAERGNGRMI TDGKWKLVRY YKKDGQPIDY WYDLTHPMKE RYLAEPPRSA VKTKMVAALD EFFAIYETPE HSGKDIWHQP RPNFNSEKLL NKPLWQ
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