| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3877 |
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| Symbol | |
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| ID | 4175657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4672182 |
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| End bp | 4673084 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056905 |
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| Product | hypothetical protein |
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| Protein accession | YP_663431 |
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| Protein GI | 109900176 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.421169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAATTAC GCGATTTTAT CGAGCTAGTC TTGCTTGCAA GCATTTGGGG GGCCGCATTT
ATTTTCACTC GCACCGCCAC GCCTGAATTT GGTCCAATAA GCTTAATCAC CATGCGAGCA
AGTATTGCCA GCCTCATTTT GCTGCCATTT GTGTGCAATC GCGTCGCAAT CAGACAAATA
ACCGAGCATT GGCGCGGTAT TTTAATAGTT GGGTTAACCA ATACTGCCAT ACCATTTTGT
TTATTTAGCT ACAGTTTATT ACACATAGGA GCTGGATATG CTTCTGTGAT GAACGCTACA
GCCCCTATGT TTGGGGCAAT GATTGGCTGG TTGTGGTTAA AGCAGCGCAT ACCTAGCGTT
GCAGTACTGG GGTTGTTGAT TGGTTTTCTT GGGGTTGCAG TGCTTAGTGC TGCGCAGGCC
GCCGCATTTG ACGGCATTTC CATTTTGCCC ACTTTAGCGA CTTTAGTTGC CACCGCCCTA
TACGGCTATG CTGGCTGCTT TACTAAGCAA CACCTCAGCG CCGTGGGTCC AATGGCGCTA
GCCGCAGGCA GTTTGTTTGC AGCAACACTG TGTCTGTTAC CACTGAATAT TTGGTTTATG
CCTAGCACGC TTCCTTCGCC AAGCAGTTGG GTTGATGCCA TTGCTCTTGG TGCACTTTGC
ACTGCATTAG CTTATTTGAT GTACTTCAGA TTAATCGCCA AAGTCGGCCC AAGCAATGCC
CTAACCGTGG CTTACCTAAT TCCAGCCTTC GGTATTCTGT GGGGGATTGT CCTATTAAAT
GAGACCTTAA CACCTTCGAT GTGGGTAGGC GTGATATTAG TTATATGCGG TGTGTTACTC
GTCACCGGAG TGGCAAGCCG CGTGATAGCA AAACGTAGGT TAAAAGCCAA ACCTGCGGTG
TAA
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| Protein sequence | MQLRDFIELV LLASIWGAAF IFTRTATPEF GPISLITMRA SIASLILLPF VCNRVAIRQI
TEHWRGILIV GLTNTAIPFC LFSYSLLHIG AGYASVMNAT APMFGAMIGW LWLKQRIPSV
AVLGLLIGFL GVAVLSAAQA AAFDGISILP TLATLVATAL YGYAGCFTKQ HLSAVGPMAL
AAGSLFAATL CLLPLNIWFM PSTLPSPSSW VDAIALGALC TALAYLMYFR LIAKVGPSNA
LTVAYLIPAF GILWGIVLLN ETLTPSMWVG VILVICGVLL VTGVASRVIA KRRLKAKPAV
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