| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3872 |
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| Symbol | |
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| ID | 4175652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4664747 |
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| End bp | 4666309 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056900 |
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| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
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| Protein accession | YP_663426 |
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| Protein GI | 109900171 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00254916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGACA ATAATTGCTC AACTCCCTCG ATGGATGATC CAGAACATAT TTTGGAATTG
CGCCATTTAA CCATAGATGA TTATGCCGAC GTAAAAGAGC TTATGGACAT CGTCTATTCT
CAAGTTGGTG GGGCCTGGCC TTTGAAAAAT TTTCAATCGC AGTTGAATGT TTTTCCTGAA
GGGCAAATCT GTATAGAAGA TAAAGGCAAG GTTGTCGCTG CCGCCATTTC AGTGATAATC
GATTACGATA AATTTGGTGA TAAACATACC TATGAAGACA TTACCGGTGA CGCATATATG
TCTACCCACG ATCCAAAGGG TGATGTGCTT TATGGCGTAG ACCTTTTTGT GTCTCCTGAG
TATCGAGGCT TGCGATTAGG GCGACGCTTG TATGAAGCAC GCAAAGAAGT GTGCCGGAAT
CTAAACTTAA AATCGATTGT GGCTGGTGGG CGGATTCCTA ACTACACCAA GTATGCAGCG
CAGATGTCAC CATATGAATA TGTTGAGTTA GTCAAATCAA AAGACATTCA CGATCCAATT
TTAACCTTCC AATTGTCCAA TGGCTTCGAA GTAAAACAAT TACTTAAAGC GTATTTCCCT
GAGGATAAAG CGTCTCGTGG TTACGCTACG CTGCTTCAAT GGCACAATAT TTACTATGAC
CCTGAAGAGC CTGAGTTGTT GGGTAGCCAG CGCAACTCAG CGCGTATCGG ATGTATTCAA
TGGCAAATGC GTTATTTCAA TGATGTGCCA GAGTTGCTCC AGCAAGTTGA ATATTTCGTG
GATGCCTTGT CAGATTACAA ATGTGACGTC GCACTTTTTC CTGAATTTTT TAACGCACCA
TTAATGGGGA TTAAGCAGGC TGATACATCT ATCGATGCGA TTTGGAATTT AGCCACTTAC
ACGGATGAAA TCCTCACCGA AATTTCACGT TTAGCTGTCT CGTATAATAT AAATGTTATT
GCCGGGTCGG TGCCGGTTAT CGAAGAAAAT GAACTGTATA ATGTGAGCTA TTTTTGCCAC
CGAGATGGGC GTGTTGAAAG CCAATATAAA TTGCATCCGA CACCACATGA GAAAAAAGAT
TGGATCATGC AAGGGGGGAA TCAATTACAA GCATTCGATA CTGATTTTGG TAAAGTCGGC
ATTCTGATTT GTTACGATGT TGAGTTCCCT GAATTGGGCC GTTTATTGGC AGAGCAAGAT
ATTCAAATCT TATTCGTTCC GTTTTGGACT GACACCAAAA ATGGCTACCT GCGTGTACGT
CGTTGCTCTC AAGCTAGGGC GATAGAAAAC GAATGTTACG TAGCAATTGC GGGCAGTGTG
GGTAACCTTC CTAAGGTTGA TAACGTGGAC ATTCAATACG GTCAAACCGC TGTGTTTTCC
CCATCGGATT TCGCATTTCC CCATGATGCA ATAGTGTCAG AAACGACGCC GAATACTGAA
ATGACGCTGA TCGTTGACTT AGATTTTGAT AAGTTAAAAC AACTTAAAAA TGAAGGGTCT
GTGAGAAACT ACTTAGATCG CCGCCGAGAC TTATATGAAG TGAAGTGGAA GGGCCCGAAG
TAA
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| Protein sequence | MHDNNCSTPS MDDPEHILEL RHLTIDDYAD VKELMDIVYS QVGGAWPLKN FQSQLNVFPE
GQICIEDKGK VVAAAISVII DYDKFGDKHT YEDITGDAYM STHDPKGDVL YGVDLFVSPE
YRGLRLGRRL YEARKEVCRN LNLKSIVAGG RIPNYTKYAA QMSPYEYVEL VKSKDIHDPI
LTFQLSNGFE VKQLLKAYFP EDKASRGYAT LLQWHNIYYD PEEPELLGSQ RNSARIGCIQ
WQMRYFNDVP ELLQQVEYFV DALSDYKCDV ALFPEFFNAP LMGIKQADTS IDAIWNLATY
TDEILTEISR LAVSYNINVI AGSVPVIEEN ELYNVSYFCH RDGRVESQYK LHPTPHEKKD
WIMQGGNQLQ AFDTDFGKVG ILICYDVEFP ELGRLLAEQD IQILFVPFWT DTKNGYLRVR
RCSQARAIEN ECYVAIAGSV GNLPKVDNVD IQYGQTAVFS PSDFAFPHDA IVSETTPNTE
MTLIVDLDFD KLKQLKNEGS VRNYLDRRRD LYEVKWKGPK
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