Gene Patl_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3868 
Symbol 
ID4175648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4662204 
End bp4662956 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content49% 
IMG OID638056896 
Productputative hydrolase 
Protein accessionYP_663422 
Protein GI109900167 
COG category[R] General function prediction only
[E] Amino acid transport and metabolism 
COG ID[COG1387] Histidinol phosphatase and related hydrolases of the PHP family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0341145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAT TGGTTGATAC GCACTCGCAT ACGGTCGCCA GCACACATGC GTATAGCACT 
GTGCATGAGT ACGCTGTGCA GGCCAAACTT AAAGGGATGC AAATGTTCTC ACTCACTGAA
CATGGCCCGT CGATGCCTGA CTCTCCTCAT CCGTGGCATT TCGGTAACCG CCATGTTCTG
CCGCGTTTTG TCGATGGCGT TGCGATATTA CGCGCAATCG AAGCGAATAT TATGCCGGTC
AATGGTGGCC ATGATATTCC AAACGGTCTT CATCCCTTTC TCGATTTTGC CATCGCGAGT
TTCCATGAGC CCGTTTTTAC GCCAGCAGGG AAAGCGCAAA ATACGCAAGC CATGATAACC
ACTATAGAAA CGGGTGACAT ACAGATTATT GGCCATCCTG GGAACCCTAA TTTTCCCATT
GATATAGGTG AAGTGATCCG AGCCGCAAAA GATAACAATG TGGTTTTAGA AGTGAATAAC
AGCTCATTTA AAGGCTCGCG TTCTGGCAGC GGCCCTATTT GCAAACAGGT ACTTGAGATG
ACAGACCAGC TCGATTGGAA GGTGGTGTTT TCAAGTGATG CTCATGTGGC ATACGATATT
GGGAATGATG CTTCAAGTCG CGCGTGTGCT GAGGAAGTTG GTTTTCCCCT AGAGCGAATT
GTGAATCGCG ACGCACATCA TTTTGTGGCG TTTTTGGCCC AGCATAATAA GTCTGTCGCC
ACCGAGTTGC AGGATTGGTT AGGCGCACTG TGA
 
Protein sequence
MTLLVDTHSH TVASTHAYST VHEYAVQAKL KGMQMFSLTE HGPSMPDSPH PWHFGNRHVL 
PRFVDGVAIL RAIEANIMPV NGGHDIPNGL HPFLDFAIAS FHEPVFTPAG KAQNTQAMIT
TIETGDIQII GHPGNPNFPI DIGEVIRAAK DNNVVLEVNN SSFKGSRSGS GPICKQVLEM
TDQLDWKVVF SSDAHVAYDI GNDASSRACA EEVGFPLERI VNRDAHHFVA FLAQHNKSVA
TELQDWLGAL