| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3848 |
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| Symbol | |
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| ID | 4175628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4643516 |
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| End bp | 4644202 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056876 |
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| Product | DNA mismatch repair protein |
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| Protein accession | YP_663402 |
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| Protein GI | 109900147 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3066] DNA mismatch repair protein |
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| TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.662475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTCTAATA ATCCATCACA AATTAAAGCC CCACCAAACA GTATTGACGA ATTGCTTGAA
CGCGCTGGAT CACTGGCAGG GCTGACCTTA GGCGAGTTAG CACAAAGCAA GAATATTCGT
GTTCCCAACG ATTTTAAGCG TGAAAAAGGC TGGAGTGGTC AGCTACTTGA GCTGGCTCTA
GGTGCCGAAG CGGGCTCAAA AGCGCAGCAA GATTTTGCCA GTATAGGCGT TGAACTCAAA
ACCATCCCCA TTGACGTAAA CGGGTATCCT CTTGAAACGA CTTATGTTTG TTATGCGCAT
TTAGTTGATG TGGCAGGTAT TCACTGGGCC ACCAGTAGCG TGCGCAATAA GCTAAATAAA
GTCTTGTGGG TTCCCATAGA TGGCAGGCGC GACATCCCCC CAAGCGAGCG CGTTATAGGC
ACACCATTTT TATGGTCCCT ACAAGGTCAA CAAGAAGCGT ATTTGCGCCA AGATTGGGAG
GAAATAATGG ACATGATTGC CATGGGGGAC ATTGAAAAGG TAACCGCGCG CTATGGTGAG
TATATGCAGT TACGCCCTAA AGCTGCGAAC GGCAGCGTCT TAACCGATGC TATAGGGAAA
AATGGCCAAA TCATTCAAAC TCGCCCTAGA GGATTCTATT TAAGAAAAGA ATTCACCCGT
AAAATTTTAC ATGACTACTT CTCGTGA
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| Protein sequence | MSNNPSQIKA PPNSIDELLE RAGSLAGLTL GELAQSKNIR VPNDFKREKG WSGQLLELAL
GAEAGSKAQQ DFASIGVELK TIPIDVNGYP LETTYVCYAH LVDVAGIHWA TSSVRNKLNK
VLWVPIDGRR DIPPSERVIG TPFLWSLQGQ QEAYLRQDWE EIMDMIAMGD IEKVTARYGE
YMQLRPKAAN GSVLTDAIGK NGQIIQTRPR GFYLRKEFTR KILHDYFS
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