| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3839 |
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| Symbol | |
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| ID | 4175619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4634346 |
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| End bp | 4635638 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056867 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_663393 |
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| Protein GI | 109900138 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000632854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTAA ATAAAATTCT TTTGGCGGTG GGTTTAAGCA CCTTATCTTT AAATACCATG
GCGGCGGCTT TTCAATTGTC TGAGCACAGC GCATCAGGAC TTGGGCGCGC TTTCGCGGGT
GACGCAGCGA TCGCCGAAAA TGCTTCAGTT GTGGCGCGCA ATCCCGCTTT AATGTCGCAA
TTTAGCGAAA ACCAGTTATC GGTAGTGGGT ACTTATATTG TTCCGGATGT GAGCTTGACG
GGCGAGAGTG CGCCAGCTTA TTCCAGCGCT GATGCATTGA ATGACGACAG CATTGCTCCC
GAGGCATTTG TACCTGCAAC TTATTACGTC ATGCCGCTTG ATGACAAGTT TGCATTAGGC
TTTGGTTTGT TCTCAAACTT TGGTTTAGCA ACTGACTTCG CCGAAGATTA CGCCGCAGGC
CAGTTGGCGG GCAAGACCGA AATCCTAACG GTTAATTTTA ATACAAGCTT GTCATATAAG
ATAAACGAAC AGTTGACTGT TGCTGGTGGG CTGAATGTTG TGTACGCCGA TGCCACTATT
ACTCGTCATT TAGGCGATTT AAGTAATGCT CTATCTGCCC AAGGATTAGT TATTCCGTCG
AGCACGACGG GACTTGATTT GGAAGGCGAT GACTACGGTT TTGGCTATAA CCTAGGCGTA
GCTTACGATT TTGATGAAAA TTCGCGCTTT GGTTTTCATT ATCGCAGTAA GGTCGACATT
ACCTTTGACG GGACTTATAG CAACGACTTA CCACTTATTC CTGGGGTGTT TGACAATGGC
CAATCAGGTG CTGTTCAACC TGGCAGCGTG GATTTAGAAC TGCCAGCAAT CGCGGAGTTT
TCAGGTAGTC ACCAGTTAGA TGATAAATGG GGTGTGCACT ACAGCGTGTT GTGGACAAAC
TGGAGCAGCT TCGAGCGTTT AGAGGCGTAT GTCCCTAGCC AGGATGAGCC AGTTTTTGAA
AAGGAAGAGA ACTTTTCAAA TAGTTTCCGT TACGCCATTG GTGCAGATTA CCAGTTGAAC
GCAAAAGTGA TGTTACGAGC TGGTATTGCT TACGATGAAA CCCCAACTGA CTCTCAGTTG
TTGTCGATCT CTATTCCTGA CACCAATCGT CTATGGATAA GTGCGGGCGC AAACTATTTA
CTTGATGACA ACTCATCTAT TGATTTGGGG GTGAGTATCA TTCGCGGCCA GGACCGGACC
TTCACTGAAG AAGATGATGC TGGTGGTGAA TGGGAATTCA ATAGTGAAGG GCATGCGTTT
ATCGTGTCTG CCCAGTATAA CTATGCATTC TAA
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| Protein sequence | MNVNKILLAV GLSTLSLNTM AAAFQLSEHS ASGLGRAFAG DAAIAENASV VARNPALMSQ
FSENQLSVVG TYIVPDVSLT GESAPAYSSA DALNDDSIAP EAFVPATYYV MPLDDKFALG
FGLFSNFGLA TDFAEDYAAG QLAGKTEILT VNFNTSLSYK INEQLTVAGG LNVVYADATI
TRHLGDLSNA LSAQGLVIPS STTGLDLEGD DYGFGYNLGV AYDFDENSRF GFHYRSKVDI
TFDGTYSNDL PLIPGVFDNG QSGAVQPGSV DLELPAIAEF SGSHQLDDKW GVHYSVLWTN
WSSFERLEAY VPSQDEPVFE KEENFSNSFR YAIGADYQLN AKVMLRAGIA YDETPTDSQL
LSISIPDTNR LWISAGANYL LDDNSSIDLG VSIIRGQDRT FTEEDDAGGE WEFNSEGHAF
IVSAQYNYAF
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