| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3819 |
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| Symbol | |
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| ID | 4175599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4610753 |
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| End bp | 4612030 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056847 |
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| Product | major facilitator transporter |
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| Protein accession | YP_663373 |
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| Protein GI | 109900118 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000056973 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAATG TTTCAAATTC AAGCAATGCT TCGCTTATTC GCTGGCTCAC CTACTTGATG
TTCATGATGT TTGCTATGAC GTCTGACTCG GTGGGAGAGA TCATTAAAGA AGTAAAACGA
GAATTTGACG TCTCAAATAC AGAGGCGAGT TTGATGCATT CGTTGTTCAT GATTGGTATC
GCATTCTCGG GGTTGTTTTT GGGTTTCTTG GCTGACAAGT TTGGCAGAAA GAGAACCATC
ATATTGGGTT TGTCCTTATT TGCTTTATCG TGTTACTTAT TTCTAGTCGG TAATAGCTTC
GAATTTATTT TAGGTCTCAT TACTCTGTCT GGCTTAGCGG TTGGTGTTTT CAAAACAGCA
GCCTTGGCAC TTATTGGCGA TATTTCTCGC TCTACAAAAG AGCACACTGG CACCATGAAC
GGCGCTGAAG CGTTTTTCGG TGTTGGGGCG ATTATTGGGC CGCTGATTGT TGCCTGGATG
GTCCGAGAAG GAGTTGACTG GAAATTACTT TATGTTCTTG CTGGTGGCTT GTGTACTTTG
CTTATTTTAA TGGCGTGGAA AGTCGATTAT CCGGAGCATG TGCCTGCTGC TAAAACCCAC
AAGCCGGTTA ATTTCATGAG TAGTCTGAAA TTGCTTAAAA ACCCGTACGC TATGGGGTTT
TCTATCGGAG CCTTTTTGTA TGTCGCCGCT GAGAGCGCCA TCTACGTTTG GATGCCAAGT
TACCTAGTAT GTGACGCGGT CAATATCTCA GATTCATTTT CTTGCTATAC CAGCGGTCCC
GAAAAAATGC TTGCTGTGTA TGCAGTGTCT GTATTCTTTT CACTGCGAGC CGTCGGCCGG
TTTGTGGGCA TTTGGATGAT GCAGCACTTT AACTGGGCCC TAGTGTTGAT GTTATTTAGC
CTGGCAATCA CCCTGTGCTT CATGGGCGGC TTGGTGGGTG GTAAGAGCGT CGCTTTGTAT
CTTTTTCCTC TGACCGGTAT TTTCATGTCG GTGATTTATC CAACCTTCAA TTCAAAAGGA
ATTTGTTGTT TTGCTAAAAA CGAACATGGC ACCGTTGCGG GCGTCATCTT GTTTTTTACT
GCTGCCGGTG CAGCTGCTGG GCCTTTCATT ATGGGCATGG TCAGTGATGC TAACGGAGGG
GACGCAAAAT ACGGGTTTAT CGTTGCAACA GGTTTTTCCT GCATATTGTT TATCGGCTTA
TTACTCAACT TCATTTTCAA TCCAACGGAA GGCCGTTTAG CCACGGTCGA AGAAGCAGAA
TATGGCGCTA AGCCATAG
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| Protein sequence | MKNVSNSSNA SLIRWLTYLM FMMFAMTSDS VGEIIKEVKR EFDVSNTEAS LMHSLFMIGI
AFSGLFLGFL ADKFGRKRTI ILGLSLFALS CYLFLVGNSF EFILGLITLS GLAVGVFKTA
ALALIGDISR STKEHTGTMN GAEAFFGVGA IIGPLIVAWM VREGVDWKLL YVLAGGLCTL
LILMAWKVDY PEHVPAAKTH KPVNFMSSLK LLKNPYAMGF SIGAFLYVAA ESAIYVWMPS
YLVCDAVNIS DSFSCYTSGP EKMLAVYAVS VFFSLRAVGR FVGIWMMQHF NWALVLMLFS
LAITLCFMGG LVGGKSVALY LFPLTGIFMS VIYPTFNSKG ICCFAKNEHG TVAGVILFFT
AAGAAAGPFI MGMVSDANGG DAKYGFIVAT GFSCILFIGL LLNFIFNPTE GRLATVEEAE
YGAKP
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