Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3805 |
Symbol | |
ID | 4175585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4589280 |
End bp | 4591127 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638056833 |
Product | hypothetical protein |
Protein accession | YP_663359 |
Protein GI | 109900104 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTTT CAAAGTGCCC CATGAAACTT GCCTTATCTA TTTTAACTTT TTGCCTTTTT TTTACCGTTA GCGTAAACGC CCAAGAGCCT TGGCAATCGC GTACGTGGCA GAAACTCGTT CACTATTCTG CAAGCAGGCA TATTAGTGAA ATAAAGAACG CTGATTTTTT CCTAAGTACT CAGGGGAAAA ATAACCCCGA GGCCGAATTT GTGGCCAGCT TAGCGCTATT AACGCCATCT AACAGAATAT TCGATGAGCG AGTATGCCGC TATCCAGCCA GAGCACTTTA CTTGCGTTCC TTGGGCTATG ATGTAGTTCA TGTACCTACT TTGTGTGACA ATTTTAAACA GTGGCAAGGA GATCTCTCGA AGCAGCAGGT GAGTATTGTT TACGCCGATG GTTACCTGGG TAATCCAGCC TCATTTTATG GTCACTTGTT GTTTAAATTG AAAAGTGAAG CGTTCTCAGT AGATCTATTG AGCAATAGCT TGAATTTTGG TGCGAAAGTA CCTGATAACG AAAACCCAGT AGCTTATATC TTAAAGGGGT TAGTGGGGGG ATATGACGCC AAGTACAGCA GCAACCACTA TTACCGCTAC AATATTAACT ACGCCGAAGT TGAAATGCGT GACCTTTGGC AATATACCTT AAACTTAACG TCTGACGAAA AGACAATATT GATTGCCCAT GCTTGGGAGT TGCTTTTCAC AGAGTATCGA TATTATTTTA CCCACCGCAA TTGCGCGTAT CATATTGCCA AAATGCTCGA GCTAGTATTA GAGCAAGACT TGATATCAAA TAGGCGGCCT TTCGTATTAC CCATCAGCGT ATTTTCGGCT CTTGAGCAAG CAACAACGAT TTCAGGTCAC CCCGCCGTGC AAAAGGTAGA GCACGCTCTT TCTCGCCAAG CTCGGTTCAG ACAACATTTT GCTGAATTAG ATGTGACGAT GCAGGAGACA CTAAGCGACA TTGTTAATAA CGCAGGCACG CTGGTGGAAG TCCAAAATTA TCTTGAAGCC TTGTCATTGA AACAACAGCT GATGTTACTC GACGTTTTGC TCGACTATGT CAATTTCAGC CTAGAATTAA ATAAAGATGA TATCAAACTG CAGTCACTTA AAAGGAATGT TCAGCGGGCA CGTATCGTTT TACCAGCCAA AAAAGTGCAG TGGAGCACAC ATACTGAAGT ATTGCCGCAC ACAGGACAGA ACCCCACGAC GGTGCGAACT ACATTAGGGC ACAATAATGG CCTCGGAGGC TTCGCAGAGA TTATGTTTCG CCCTGCTTAC TACGACATGC TAGCCCGGGG CGGTGGTATT TTACCAAACT CAGCATTATC AATGGCGGCG CTGTCAGTAC GTTTAACGGA TGACAATTTG GCGCTGAGTA AACTCGATTT GCTAAATATA GAAACGGTCG ACACCGGTGC GACTGGTTTA CGTGGTGATA TAGGCATTGC GTGGCAGCTG CGCTTGGGTA ACGAACGTGA CTATTTAGGG CCAGCAGATG TCAGCAATGA ATTTTTCCTA GAAAGTGGCT TCGGTAAAGG AATTGCGATG GGGGATACTA CGCTTTATGC ATTGGCCGTT GGCAGAATGC AAACACCTGA CTCACTGGAT ACACGCTTTA TGATATTACC GACCTTGGGT GTTCTATGGC AAACGGATGC GTACAAAGGC TTGTGTAAAA TCGTGTTTCC GATCCGCATA GACAGCAATG CTTATCGCAA AAGAATAAAA AGTACCTGTG AGGTCAGTAC GTTTGCATCC AAGACAACCG ATATTCGTTT CGGTATCAGT CATCATAACA ATACAGAGCT TTCCTTAAGC GGCAGTTGGT ATTTCTAA
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Protein sequence | MPVSKCPMKL ALSILTFCLF FTVSVNAQEP WQSRTWQKLV HYSASRHISE IKNADFFLST QGKNNPEAEF VASLALLTPS NRIFDERVCR YPARALYLRS LGYDVVHVPT LCDNFKQWQG DLSKQQVSIV YADGYLGNPA SFYGHLLFKL KSEAFSVDLL SNSLNFGAKV PDNENPVAYI LKGLVGGYDA KYSSNHYYRY NINYAEVEMR DLWQYTLNLT SDEKTILIAH AWELLFTEYR YYFTHRNCAY HIAKMLELVL EQDLISNRRP FVLPISVFSA LEQATTISGH PAVQKVEHAL SRQARFRQHF AELDVTMQET LSDIVNNAGT LVEVQNYLEA LSLKQQLMLL DVLLDYVNFS LELNKDDIKL QSLKRNVQRA RIVLPAKKVQ WSTHTEVLPH TGQNPTTVRT TLGHNNGLGG FAEIMFRPAY YDMLARGGGI LPNSALSMAA LSVRLTDDNL ALSKLDLLNI ETVDTGATGL RGDIGIAWQL RLGNERDYLG PADVSNEFFL ESGFGKGIAM GDTTLYALAV GRMQTPDSLD TRFMILPTLG VLWQTDAYKG LCKIVFPIRI DSNAYRKRIK STCEVSTFAS KTTDIRFGIS HHNNTELSLS GSWYF
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