Gene Patl_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3745 
SymbolrpsR 
ID4175525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4509142 
End bp4509369 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content42% 
IMG OID638056775 
Product30S ribosomal protein S18 
Protein accessionYP_663301 
Protein GI109900046 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0238] Ribosomal protein S18 
TIGRFAM ID[TIGR00165] ribosomal protein S18 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00458678 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTT TTTTTAGACG TCGTAAATTC TGCCGTTTCT CAGCTGATGG TGTTGTTCAG 
ATCGATTATA AAGACATCGC TATGTTGAAA AACTATGTCA CTGAAAGTGG TAAAATCGTA
CCTAGCCGTA TCACTGGAAC TAGCGCTAAA TATCAGCGTC AGTTGTCAAC TGCTATCAAG
CGCGCGCGCT TCCTAGCATT GCTTCCATAT ACTGATTCTC ACAAGTAA
 
Protein sequence
MARFFRRRKF CRFSADGVVQ IDYKDIAMLK NYVTESGKIV PSRITGTSAK YQRQLSTAIK 
RARFLALLPY TDSHK