Gene Patl_3734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3734 
Symbol 
ID4175514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4501061 
End bp4501555 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content45% 
IMG OID638056764 
Productredoxin 
Protein accessionYP_663290 
Protein GI109900035 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2077] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.085288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAG TGACTTTAAA AGGCAATCCA TTTAATACCG TCGGCGCTTT ACCAAGTGTT 
GGTGAAAGCG CGGCTGATTT TCGTTTAGTG AAAACAGATC TATCTGAAAC GACCTTAGCT
GATTATAAGG GTTCACGCTT AGTTCTGAAT ATCTTCCCCT CAGTCGATAC CCCGACTTGT
GCCATGTCTG TTCGTAAATT CAATGAGCAA GTGGGTAAGT TAGAGAACAC CAAAGTGTTA
TGTGTCTCTG CGGATTTACC TTTTGCGGCC GCACGTTTCT GTGGTGCTGA AGGTATCGAA
AACGTTGCTA CAGGTTCAAG TTTCAGAGGT ACATTTGGCA CTGACTATGG CGTTGAGTTT
GTTGATGGGC CATTAACTGG CTTGTTGTCA CGTAGTGTGG TGGTACTTGA TGAAAACGGA
AAGGTTATTT ATACCGAGCA AGTAACTGAA ACGGCTGATG AGCCTGACTA TGATGCGGCG
ATTGCTGCGT TGTAA
 
Protein sequence
MSTVTLKGNP FNTVGALPSV GESAADFRLV KTDLSETTLA DYKGSRLVLN IFPSVDTPTC 
AMSVRKFNEQ VGKLENTKVL CVSADLPFAA ARFCGAEGIE NVATGSSFRG TFGTDYGVEF
VDGPLTGLLS RSVVVLDENG KVIYTEQVTE TADEPDYDAA IAAL