Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3718 |
Symbol | |
ID | 4175498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4479376 |
End bp | 4480059 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638056748 |
Product | hypothetical protein |
Protein accession | YP_663274 |
Protein GI | 109900019 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAACAA TAGCAGAACG ACTTAAAATC GCACTGAAAA CAATCACTCA GAGTGTTTGT GATGCTAATC GTCCAGCAAA TTCAGTCAAA TTACTAGCCG TAACCAAAAC CAAACCCGTA TCAGATATCG TGCAAGCGTA TGAAGCGGGA CACCGTTTAT TTGGTGAAAA TTATGTACAA GAAGGTGTCG GCAAGATTCA GCAGCTCAGG GAATTAAGCG ATATTGAATG GCATTTTATC GGCCCTTTGC AATCAAACAA GACCCGCCCT GTGGCTGAAA ACTTCGATTG GGTGCACAGC ATCGACCGCT TGAAAATCGC CCAGCGATTA AACGACCAAC GTAGTGCTCA TAAAAAACTA AACGTGTGTA TTCAAGTTAA TGTTGATAAT GAGAGTAGTA AGGCGGGTGT GGCAGTGGAT GAAGTCAGTA CGTTGGCTGA GCAAATCAGT GTCATGCCTA ATTTAGCGTT ACGCGGGCTG ATGACGATCC CAAAGGCACA ACAAAATGAT GGTATGCAGC GTAAAAGTCT GTTGGTGATG AACGAGCTAT TCTTACAACT ACAGACAAAA TATCCGCAAA TTGATACCCT AAGTATGGGA ATGTCAAACG ATATGCAACT TGCTATCGAA TGCGGTTCAA CCATGGTAAG GATCGGCAGC GCTATTTTTG GTTCCCGTCA GTAA
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Protein sequence | MGTIAERLKI ALKTITQSVC DANRPANSVK LLAVTKTKPV SDIVQAYEAG HRLFGENYVQ EGVGKIQQLR ELSDIEWHFI GPLQSNKTRP VAENFDWVHS IDRLKIAQRL NDQRSAHKKL NVCIQVNVDN ESSKAGVAVD EVSTLAEQIS VMPNLALRGL MTIPKAQQND GMQRKSLLVM NELFLQLQTK YPQIDTLSMG MSNDMQLAIE CGSTMVRIGS AIFGSRQ
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