Gene Patl_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3708 
SymbolacpS 
ID4175488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4470916 
End bp4471296 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content47% 
IMG OID638056738 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_663264 
Protein GI109900009 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.314229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGTGA TGGGATTAGG CACAGACATA ATTGAAATCG GGCGTATCGA GAAGCAATTG 
ACGCGCTCTC ATCGTTTAGC ACAGCGCGTA TTGACCGCTA CTGAACTGGC AATTTTTGAC 
GAGCACTCGT TTCCAGCCCG CTATTTGGCT AAGCGTTTTG CCGCTAAAGA AGCTGCGGTC 
AAGGCATTAG GAATTGGCAT AGGTAACGGC ATCAGCTTTC AAGATGTTGA AGTGCACAAT 
TTGCCCTCAG GACAACCTTT TCTGAAGTTC TACGCAAAGT TTGCCCAACT ATGTGAGCAG 
CGTAATATTA CCTCAAGCCA TATCTCGATT TCAGATGAGC AGCATTACGC AATTGCCACT 
GTCATTTTAG AGTCCCCCTA A
 
Protein sequence
MAVMGLGTDI IEIGRIEKQL TRSHRLAQRV LTATELAIFD EHSFPARYLA KRFAAKEAAV 
KALGIGIGNG ISFQDVEVHN LPSGQPFLKF YAKFAQLCEQ RNITSSHISI SDEQHYAIAT 
VILESP