| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3688 |
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| Symbol | |
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| ID | 4175468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4452315 |
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| End bp | 4453514 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056718 |
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| Product | membrane dipeptidase |
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| Protein accession | YP_663244 |
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| Protein GI | 109899989 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.083911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCT TACATAGAAC TGCATTATTT ATTGCCTGCA CACTGGCTTT TTCGAGCCCG
GTGAGCGCAG CCTATCAGGC GTCAGAAAAG GCAACTCAGC TAGCCCAAGA CACCATTCTG
ATAGATTCGC ATATAGATGT GCCCTATCGC GTCAGTGAAA AATGGGTCGA TGTTACACAG
TCCACTGATG GCGGCGATTT TGACTATCCA CGAGCAAAAG CAGGTGGTTT AAATGCGCCT
TTTATGTCTA TTTATGTGCC CGCCAGCCTT GATGATTCTG ATGAGTCCAC TGCGCTTGCC
CATAAACTGA TTGATTATGT AGAGGCGATT GTCGGGCGTG CACCGGATAA ATTTGCGATT
GCGAAGAGCG TTGCGGATGT AAGAGAGCAG TTTAAACAAG GTTTGATTTC ATTGCCCATG
GGGATGGAGA ATGGCTCTCC TATTCAAGGT GACTTGGATA ATCTTAAAAC ATTTTATGAG
CGCGGTATTC GCTATATCAC CCTCGCTCAT TCCCAAAGCA ACCATATTGC TGACTCTTCT
TACGATATCC GTCGTAAATG GAAGGGCTTG AGCCCTTTTG GTAAAACCTT GGTCGAAGAA
ATGAATAACA TAGGCGTAAT GGTAGATATT TCGCACGTAT CTGATAAAGC ATTCTATCAA
GCTATCGAAG TGAGCAAGGT GCCTGTTATC GCTTCTCACT CTTCATTACG TAAGTTCACC
CCAGGCTTCG AACGTAATAT GGACGATGAC ATGATCAAAG CCCTAGGTGA TAACGGCGGT
GTCATTCAAA TCAACTTTGG CTCTACTTTT GTCAGCAAAA TTTCACAAAA CTGGCGTAAT
CAGATGACGG CTAAGCGTAA AGCGCTTGTG GAAAAAGAAG GTAAAGACAG TCCATTAGTC
ACTGCTTTTG ATGAAGAATA CACGGCTAAA AACCCCTTCC CGTTCGCCAA CGTGGATACC
GTGCTAGATC ACATTGACCA CGTAGTCGAA CTTATCGGCA TTGACCATGT GGGTATTGGT
TCAGATTATG ACGGTGTAGG TGACTCATTG CCAGAAGGCT TGAAGGACGT GTCTACCTAT
CCCAATTTGG TACAAGGTTT AATGGATCGA GATTACTCAC AAGCGGATAT CAAGAAAATA
CTAAGTGGTA ATTTCTTACG TGTTTGGCAA GCAGTGGAAA CTTACGCAGA ACAGCATTAA
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| Protein sequence | MNTLHRTALF IACTLAFSSP VSAAYQASEK ATQLAQDTIL IDSHIDVPYR VSEKWVDVTQ
STDGGDFDYP RAKAGGLNAP FMSIYVPASL DDSDESTALA HKLIDYVEAI VGRAPDKFAI
AKSVADVREQ FKQGLISLPM GMENGSPIQG DLDNLKTFYE RGIRYITLAH SQSNHIADSS
YDIRRKWKGL SPFGKTLVEE MNNIGVMVDI SHVSDKAFYQ AIEVSKVPVI ASHSSLRKFT
PGFERNMDDD MIKALGDNGG VIQINFGSTF VSKISQNWRN QMTAKRKALV EKEGKDSPLV
TAFDEEYTAK NPFPFANVDT VLDHIDHVVE LIGIDHVGIG SDYDGVGDSL PEGLKDVSTY
PNLVQGLMDR DYSQADIKKI LSGNFLRVWQ AVETYAEQH
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