| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3666 |
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| Symbol | |
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| ID | 4175446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4423032 |
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| End bp | 4423937 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056696 |
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| Product | alpha-L-glutamate ligase |
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| Protein accession | YP_663222 |
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| Protein GI | 109899967 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000125802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAG CTATTTTATC GCGTAACCAA AATCTATATT CCACCAAACG CCTCAAAGAA
GCAGGTGAGA GCTTGGGCCA TGAAGTTGAT GTTATTGACA CCCTTCATTG CTACATGGAC
ATCAGCAGCA ATCGCCCGGC CGTTCGCTTT AAAGGGGAAG CACTGCCCTA TTACGACGCC
ATAATTCCGC GCATTGGTGC ATCTGTGACG TTTTATGGAA CAGCCGTGGT TCGTCAATTT
GAAATGATGG GTACTTTTAG TATTAACGAG TCTGTGGCCA TTAGCCGTTC TCGCGACAAA
TTGCGCTCAA TGCAGCTATT GTCGCGCAAA GGTATTGGAA TGCCACGTAC AGGCTTCGCT
CGTCAGCCTG ACCGTATTGA TGATTTGATA AAAAACGTAG GAGGCGCCCC AGTAGTTATT
AAATTATTAG AAGGCACTCA AGGCATAGGC GTAGTGCTAG CCGATACGCA GAAAGCCGCA
GAATCTATCA TTGAAGCGTT CATGGGCTTG AACGCAAATA TATTAGTGCA GGAATATATC
AAAGAGGCCG GCGGAGCGGA TATTCGCTGC TTAGTCGTAG GCGGTAAAGT TGTTGCTGCA
ATGAAGCGCC AAGCTGCGGC AGGGGAATTT CGTTCAAATT TACACCGAGG GGGCTCAGCC
AGCTTAGTAC GCCTTTCGCC ACAAGAACGT AAAACAGCTA TTGATGCAGC AAAAACCATG
GGTCTTAACA TGTGCGGTGT GGATATCCTT CGTTCAAACA ATGGGCCGGT CGTGATGGAA
GTGAATTCAT CCCCAGGCCT CGAAGGAATT GAAACGGCGA CAGGCAAAGA TGTTGCTAGC
ATGATCATCG AATTTATTGT AAAAAATGCC AAGCCAAATA ATACCAAGAC CCGAGGCAAA
GGCTAG
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| Protein sequence | MKIAILSRNQ NLYSTKRLKE AGESLGHEVD VIDTLHCYMD ISSNRPAVRF KGEALPYYDA
IIPRIGASVT FYGTAVVRQF EMMGTFSINE SVAISRSRDK LRSMQLLSRK GIGMPRTGFA
RQPDRIDDLI KNVGGAPVVI KLLEGTQGIG VVLADTQKAA ESIIEAFMGL NANILVQEYI
KEAGGADIRC LVVGGKVVAA MKRQAAAGEF RSNLHRGGSA SLVRLSPQER KTAIDAAKTM
GLNMCGVDIL RSNNGPVVME VNSSPGLEGI ETATGKDVAS MIIEFIVKNA KPNNTKTRGK
G
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