Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3634 |
Symbol | rbgA |
ID | 4175414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4376168 |
End bp | 4377172 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056664 |
Product | ribosomal biogenesis GTPase |
Protein accession | YP_663190 |
Protein GI | 109899935 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.909228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATTC ATTGGTATCC TGGGCACATG CACAAAGCCC AGAAGGAAAT AAAAGAATTA TTGCCGCAAG TAGATTTACT GATAGAAGTG CTTGATGCGC GAATTCCTTA TTCCAGTGAA AATCCAGCCA TTGCCGCTAT TCGTGGTGAC ACGCCTTGCA TCAAGGTGTT GAGTAAATCT GATTTAGCTG ACCCTGATGT AACCGCAATG TGGCAAGCGC ATCTTGAACA AGAGCGCGGA GTGAAAACAT TCACTACCAC CACAGAACAA CCGCAAAAAA TGAAGCAGAT CATCGATTTG TGCCGCAAAA TGTTGCCTGA AAAAGACGCC AGCATTAAGA CCATTAATAC CATGATTTGC GGTATTCCTA ATGTGGGCAA GTCTACCCTT ATCAATATAT TGGCAGAGCG CATCATAGCC AAAACAGGGA ATGAACCGGC GGTGACAAAA GCTCAACAAA GGATCAACCT AGGCAGTGGG ATTATTCTTT TTGATACGCC AGGTATTTTA TGGCCTAAGG TGGAAAACCC GCAAAGTAGT TATCGTTTAG CCACAACCGG TGCAATTAAA GATACCGCGA TGGAATATGA CGACGTGGGC TTTTTTGCAG CAGATTACTT AATCAAAGCT TACCCAGATT TACTTAAAGA GCGCTACAAG CTTGAAAATA TTCCTGATAC GGAAATAGAA TTTCTAGAAA TGGCCGCAGC TCAGCGCGGC GCATTGCGCG CAGGCGGGCG AGTGAATTTG CATAAAATAT GCGAAGTCTT GGTTAACGAA TTTCGCTCAG GCAAGTTAGG TCGCATTAGT CTTGAAACCC CTGACATGAT TGTGAAGGAA GAGGCTGAAA TGGCCGCTGC TGAAGCAAAG AAAGCAGAAG AAAAAGCGCT GCGTAAAGAG CGCTTTAAAA CTGGCTCGCT GACGCGTGAT AAAAAAGCCC AGAAAGAGCA CCGTATTGAG CGCGTACAAC GGCGCAGCAA AGAGAAGCAA GCGCGCAAAA AATAA
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Protein sequence | MSIHWYPGHM HKAQKEIKEL LPQVDLLIEV LDARIPYSSE NPAIAAIRGD TPCIKVLSKS DLADPDVTAM WQAHLEQERG VKTFTTTTEQ PQKMKQIIDL CRKMLPEKDA SIKTINTMIC GIPNVGKSTL INILAERIIA KTGNEPAVTK AQQRINLGSG IILFDTPGIL WPKVENPQSS YRLATTGAIK DTAMEYDDVG FFAADYLIKA YPDLLKERYK LENIPDTEIE FLEMAAAQRG ALRAGGRVNL HKICEVLVNE FRSGKLGRIS LETPDMIVKE EAEMAAAEAK KAEEKALRKE RFKTGSLTRD KKAQKEHRIE RVQRRSKEKQ ARKK
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