| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3627 |
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| Symbol | |
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| ID | 4175407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4365763 |
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| End bp | 4367997 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056657 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_663183 |
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| Protein GI | 109899928 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000139063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTGT TAAAACTATC CGCGTTATGC AGCGCGCTTA TCAGTGCAGG CGTTTATGCC
GCAGAAAAAC CAATCCAAAA AGATGAACAA AGTATTGAGA CCTTAGTTAT CACTGCCAAC
CCCATTGGCC GTTCGGTGCT TGAATCCGCG ACTCCTGTAA CTATTTTAGG CGGTGAAGCA
TTAGATAATT CTCAAGCGGC TACGTTAGGT GAAACCCTCA AAGGTCTGCC CGGCGTTAAC
AGTACCTACT TTGGTCCTGT CGCCAGTAGC CCAATTATTC GCGGTTTAGA TGGTCCACGA
GTTAAAGTAT TGCAAAATGG ATTAGACGCT TCTGATGCGT CTCGCGTCGG CCCTGATCAT
GTCACCACGG TTGAGGCCGC AACGGCCACT CAAATTGAAG TATTGCGTGG CCCTGCCACC
TTACTTTATG GCAGTGGTGC AATTGGCGGC GTGGTCAACG TGGTAGATAA TCGTTTACCT
CGCGAGCGTC AAGAAGACAT TAACGGTGAA GTGGCCACAT CTTACGATAC CGTGTCGAAC
GAAAAGATGT TGTCAGGTGA TATCAACGGT GGCGTGGGCA ATTTTGCTTT TCATGCTGAC
GGTTTTACCC GTGACAGCGA TGACTACGAC ATCCCTAATG AAGCCAGTGA TGCAGATTCT
GACAGCATAG GTAAATTAGA AAACTCAGCC ATTGATGCCA CCGGTGGCAC CTTAGGTATT
GGCTGGATAG GTGACGACGT CAATGTGGCC TTTTCATATG CCCGTTTGGA TAACGAATAT
GGCATACCGG GTCATGAGCA TGCACATGAG GAAGACGAGC ACGATGAAGA AGACCATGAT
GAGGACGATC ATGACGACGA ACATGAAGAA GAGCATGAAG AAGAAAGCGT ATTTGCACGC
TTAAAGCAAA ACCGGTATCA ATCTAGAGTC GATTGGCAAA ACATTGACGG GCCATTTACT
CAGGTACATT GGCTCAATGC ATATACAGAT TATGAGCACA GTGAAATTGA AGATGGCGCA
GTGGGTACCA CGTTCAGCAA TGAAGCAAAA GAGTCTCGTT TATGGGCAAA GCATGCACCA
CTAAGTGGAT GGGAAGGCGT GGTAGGTATT CATTACACCT CATCTGACTT TTCTGCTCTG
GGGGATGAGG CATTCACACC CAGTACCAAA ACCACCTCTA CTGCGCTATT TATATTAGAA
GAGAAGCAAA CAGGCGCGTT CTTATGGCAA CTCGGGGCAC GCTTCGAGCA TACCAAACAT
CAGCCAGATA ACACCTTTTT CGCTGAAGAA GAACATCACG AAGAGGAAGA GGAACACGAA
GAAGAGCACG GCGAGATCAA CTTCTCTGAT GGGTCTTTTA ACGCTAATAG TTTCTCAGCG
GGTGTTGTGT ACACCTTGAA TGATAGAAGC TCATTGGCCT TCAACTATGC CCGCTCTGAG
CGTGCACCTT CAGCGTCCGA AATATTTTCT AACGGCCTTC ATATCAGCAC AGGTACCTTC
GAAGTCGGTG CGGGGTTTGA TATTGAGTTG GACGAAGACG GCTATGAATT AGTCCAGTCC
ACCAGAAGTG TTGAGAACGA AGTGTCAAAC AACGTCGACT TAAGTTACCG CTATCACGGA
GATACGATCA CGGCTGATGT AAGCTTTTTC TACAACGACA TCGCTAATTA CCTGTATGAG
CAAGACACGG GACTAGACAG TGAACAACTG CACGGACACG ACGAAGAAGA AGAATTAGAA
GATGAGCACG ATCATGAAGA AGAGGTTACG CCAGTGTTTA TCTTCCGTCA GCAAGACGCG
GTTTTATATG GTTTTGAAGC CCAGCTAGAC TGGCACTTAA ATGATAACCT GCGAATCGAG
AGCTTTGCCG ATTACACTCG CGCCAAGTTA GATGAAGCCG CCAGCGAAGA AGGTAACCGT
AACGTACCGC GCATACCTGC AATGCGCCTA GGGATGGAGT TTCATTGGGA AACCGACGAT
TGGCATGCGG AGCTAGGAGC GACTCATTAT GCCAAACAGA GTCATTTTGC ATCATATGAA
ACCCAAACTG AGGGTTACAC CTTGGTGTCA GCCTCGATGA ATTACTACAC CTCAGTGGCT
GATTCAGATG TGACCTTATT TGTTAAAGGC AATAATCTGA CTGACAGGGT TGCACGGGTG
CATTCTTCTT TCTTAAAAGA TGTAGCACCA CTACCTGGTC GCTCTTTTGT GCTGGGTGCT
CGAGTTAACT TCTAA
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| Protein sequence | MSVLKLSALC SALISAGVYA AEKPIQKDEQ SIETLVITAN PIGRSVLESA TPVTILGGEA
LDNSQAATLG ETLKGLPGVN STYFGPVASS PIIRGLDGPR VKVLQNGLDA SDASRVGPDH
VTTVEAATAT QIEVLRGPAT LLYGSGAIGG VVNVVDNRLP RERQEDINGE VATSYDTVSN
EKMLSGDING GVGNFAFHAD GFTRDSDDYD IPNEASDADS DSIGKLENSA IDATGGTLGI
GWIGDDVNVA FSYARLDNEY GIPGHEHAHE EDEHDEEDHD EDDHDDEHEE EHEEESVFAR
LKQNRYQSRV DWQNIDGPFT QVHWLNAYTD YEHSEIEDGA VGTTFSNEAK ESRLWAKHAP
LSGWEGVVGI HYTSSDFSAL GDEAFTPSTK TTSTALFILE EKQTGAFLWQ LGARFEHTKH
QPDNTFFAEE EHHEEEEEHE EEHGEINFSD GSFNANSFSA GVVYTLNDRS SLAFNYARSE
RAPSASEIFS NGLHISTGTF EVGAGFDIEL DEDGYELVQS TRSVENEVSN NVDLSYRYHG
DTITADVSFF YNDIANYLYE QDTGLDSEQL HGHDEEEELE DEHDHEEEVT PVFIFRQQDA
VLYGFEAQLD WHLNDNLRIE SFADYTRAKL DEAASEEGNR NVPRIPAMRL GMEFHWETDD
WHAELGATHY AKQSHFASYE TQTEGYTLVS ASMNYYTSVA DSDVTLFVKG NNLTDRVARV
HSSFLKDVAP LPGRSFVLGA RVNF
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