Gene Patl_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3577 
Symbol 
ID4175357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4301054 
End bp4301722 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID638056607 
Producturacil-DNA glycosylase 
Protein accessionYP_663133 
Protein GI109899878 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG CCGCAACATG GCACACGCTA CTCGGTGAAG AAAAGCAGCA AGCTTACTTC 
ACCGACATGA TGAACTTTAT TGCTAGCGAA CGAGCGAACG GTAAAGTGGT TTATCCCGCC 
GCTAAAGACG TATTTAATGC CTTTAGTTGC ACCGAGTTTA ATCAAATCAA AGTGGTTATT 
CTTGGGCAAG ACCCTTACCA CGGGCCTAAT CAGGCCCATG GTTTGAGCTT TTCAGTACAA 
AAAGGCGTGA AAACACCCCC TTCTTTGAAA AACATGTACA AAGCACTGCA GCACGATTTT 
CCTGATTTTG TGGTGCCTGA GCATGGCTGT TTGCAATCTT GGGCTGAGCA AGGTGTATTT 
TTGCTTAATA CAGTGCTCAC CGTTGAGCAA GGTAAAGCCC ATTCGCATGC CAAGATTGGC 
TGGGAGAGAT TCACCGACAA AGTGATTGCA CTTATCAATG AGCATGCTCA AGACGTGGTA 
TTTCTGTTGT GGGGCAGTCA TGCCCAGAAA AAGGCAGGGC TTATTGATGC CTCAAAGCAC 
CATATTTTAA CCGCTGCGCA CCCATCCCCA TTATCTGCTT ATCGTGGCTT TTTCGAATGT 
GGGCATTTCG CTCAAACCAA TCAAATCTTG CTCGACAGCG GACGTACGCC TATCAAATGG 
CAGATTTAA
 
Protein sequence
MTQAATWHTL LGEEKQQAYF TDMMNFIASE RANGKVVYPA AKDVFNAFSC TEFNQIKVVI 
LGQDPYHGPN QAHGLSFSVQ KGVKTPPSLK NMYKALQHDF PDFVVPEHGC LQSWAEQGVF 
LLNTVLTVEQ GKAHSHAKIG WERFTDKVIA LINEHAQDVV FLLWGSHAQK KAGLIDASKH 
HILTAAHPSP LSAYRGFFEC GHFAQTNQIL LDSGRTPIKW QI