Gene Patl_3563 details

Gene Information

• Locus tag: Patl_3563
• ID: 4175343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4283336
• End bp: 4283806
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 638056593
• Product: DNA polymerase III chi subunit, HolC
• Protein accession: YP_663119
• Protein GI: 109899864
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2927] DNA polymerase III, chi subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAGG TCACGTTTTA CCTGCTTGAG CAAGAAGCAG AAGCAACCAG CCAACAGCCA 
GCGCACCTTG CGCTGGCTTG TCAATTGGCG GCCCAGTGTT TTAGCAATAA ACAGCGCTGT 
GTGGTGATGT GCCAAAGTCA GGCACAAGCA GAACAATTCG ATGAGCTGTT ATGGCAACTG 
CCTAACGATC GTTTTGTGCC GCACAACCTC ACTGGTGAAG GCCCACAAGC GGGTACGCCT 
GTTGAAATTT GCTGGCAACG CCCAAGCCAA TTTAATAAGC CGGTACTGAT TAATTTGGCT 
GACAACATGC CTGATTTTCA TGGCAAATTC AGTCGAATTT ATGATTTTGT ACCCGCCGCG 
GATGCGCTAA AGCAGCAAGC TCGTGAGCGC TATAAGCATT ATCGCGCCGC AGGCCACCAA 
CTAGATACGT TACCCAGCAC TGAGTTACTC AACTCACTCG CTGGTCATTA G 

 

Protein sequence

MSKVTFYLLE QEAEATSQQP AHLALACQLA AQCFSNKQRC VVMCQSQAQA EQFDELLWQL 
PNDRFVPHNL TGEGPQAGTP VEICWQRPSQ FNKPVLINLA DNMPDFHGKF SRIYDFVPAA 
DALKQQARER YKHYRAAGHQ LDTLPSTELL NSLAGH