| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3524 |
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| Symbol | |
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| ID | 4175303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4230811 |
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| End bp | 4232403 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056553 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetases |
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| Protein accession | YP_663080 |
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| Protein GI | 109899825 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGATA GCAAACAAGT GCAAACTAAC CAAGCTCAAT TAAAGCAAGC TCAATTAAAG
CGGGCTCATT CAAAAACAGC GCAGAGTATA AAACCGCTAC TGTTAGAATT TGGTATTCAG
GCCGGGGACA TTACGATTGA ATCTTTGGTG CTTGATAGCC GTGATGTGGC TATTCACAGT
GCATTTATTG CGCTCAAAGG CCATGTACGT GACGGGCGAG ATTTCATTCC TCAAGCGATT
AGCTTAGGCG CAAAGGTCAT CATAGCCGAG TGCGAAACCC AAGCAGAGCA CGGGCATACG
AGTATGCGCG AGCAATCGTT AATCATCAGC TTTTATGACT TATCTGCTCA GTTATCCGCA
CTTGCGGCTG CATTTTATGG TTACCCAGCC AAGTCCATAC AAGTGATTGG CGTGACGGGC
ACCAACGGCA AGACATCGAC AGTACAATTA ACCAGTCAAT TGGCAGCGCT ACTTAACAAG
CGCGCCGCGT CAATTGGCAC ATTAGGCTCG GGTGTGATTG ACCAATCAGG GGCATGCGCA
TCGCATAATG AAACGGCGAA CACCACGCCA GACGCTATCA GCATGCATAA ATTGATGGCG
CAATTTGCAC AAGATCAGGT TAAACAAGTC GCCCTTGAAG TGTCTTCTCA TGCATTAGTA
CAACAACGCG TTGCTGCGCT TAAAACAGAT GTGGCTGTGT TGACGAACTT AACGCGAGAC
CACCTCGATT ATCACGGCAC TATGCAAGCC TACGCCCAAG CTAAACGCGA GTTATTGAAG
CAACCTGAGC TAAGATTCGC GGTACTCAAC GGGAATGAAA TTGAGAGCAA GCATTGGCTG
GCGCAATTAC CTTCAGCGGT AACGCCTGTT ATTTACGGGA TCGCTGACGA GAGCTTAATG
CTAACGGACG CTGAGCATCA ATGTTTAGCC AAGGATGTCG TGTATTCGAA CCAAGGGTGC
CGATTTAAAT TGGTGAGCTC ATGGGGTGAA TGTGACATTC AATTGTCTCT ACTAGGGCGC
TTTAACATTT TTAACGCACT GGCTGCAATA GCGAGTCAGT TATGCCTAGG TGAGTCGCTA
AATGATATCG CTAAGCATGC GCATTTGTTG GTGCCGGTCA CCGGTCGCAT GGAGCGTTTT
GGTGGGGACA ACTCGCCTAC CGTGGTAGTA GATTACGCCC ATACGCCAGA TGCCTTAAAG
CAAGCGTTAG TGGCGCTTCG CCAACATAGC CAAGGGCGTT TGTCGGTTAT TTTTGGGTGC
GGTGGCGACA GAGACACAGG TAAACGCTCT TTGATGGGAG AGGTCGCTGA AACCTACGCA
GATGACATGA CCATTACCAA TGACAACAGT CGTTCGGAAG ATCCCACCGC GATTGCTACC
GATATTCTAA GTGGCTGTGT ACACCCAGAA AAAGTGCAGG TGGTACTTGA CCGCAAGGCG
GCTATTGAAC AAGCCGTATT GAACGCGACA GCGAATGACA TCATTTTAGT GGCAGGTAAA
GGCCACGAAG ATTACCAAAT TATTGGCAAC CAAACGGTTG CTTACGACGA GCGTGAATAC
GTACAACAAA TGTTTGAGAG GAACATCACA TGA
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| Protein sequence | MLDSKQVQTN QAQLKQAQLK RAHSKTAQSI KPLLLEFGIQ AGDITIESLV LDSRDVAIHS
AFIALKGHVR DGRDFIPQAI SLGAKVIIAE CETQAEHGHT SMREQSLIIS FYDLSAQLSA
LAAAFYGYPA KSIQVIGVTG TNGKTSTVQL TSQLAALLNK RAASIGTLGS GVIDQSGACA
SHNETANTTP DAISMHKLMA QFAQDQVKQV ALEVSSHALV QQRVAALKTD VAVLTNLTRD
HLDYHGTMQA YAQAKRELLK QPELRFAVLN GNEIESKHWL AQLPSAVTPV IYGIADESLM
LTDAEHQCLA KDVVYSNQGC RFKLVSSWGE CDIQLSLLGR FNIFNALAAI ASQLCLGESL
NDIAKHAHLL VPVTGRMERF GGDNSPTVVV DYAHTPDALK QALVALRQHS QGRLSVIFGC
GGDRDTGKRS LMGEVAETYA DDMTITNDNS RSEDPTAIAT DILSGCVHPE KVQVVLDRKA
AIEQAVLNAT ANDIILVAGK GHEDYQIIGN QTVAYDEREY VQQMFERNIT
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