| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3521 |
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| Symbol | |
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| ID | 4175300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4226982 |
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| End bp | 4228307 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638056550 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_663077 |
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| Protein GI | 109899822 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTA ATCCATTAGC AAATAAAAAT ATCATCGTAG TTGGACTCGG TTTGACCGGT
TTGTCCTGCG TGAGATTTTT AGTCGCTAAA GGTGCCAATG TGAGCGCAGT GGATACCCGT
GCAGATTTGG AAGTCAGTGT ATCCGTTCCT GTGTTTCTCG GTGAACTGGA TAGCGCCCGT
TTGTGCGCCG CAGACATGCT GGTAGTCAGC CCAGGTTTGA GTTTGAAAAC ACCGGCCATC
AATGCCGCCA TTGACGCGGG CGTGCAGGTA ATTGGCGACA TCGAACTGTT CGCCATGTTC
AACAATACAC CTGTATTAGC GGTTACCGGC TCTAATGGTA AATCTACGGT GGCAACACTT
GCCTACGAGA TGTGTTTAGC GGCAGGTAAA AAAGCGTTAT TAGGGGGGAA TATTGGTATT
CCTGCCCTCG AATTGTTAGA AAAAGACGCT GACATTATTG TTTTAGAGCT ATCGAGCTTT
CAGCTGGAAA CCACCTATAC CTTGCGCCCT CACGTGGCTT GCATGTTAAA TCTCAGTGAT
GATCATTTGG ATCGCCACGG AGATATGCTG AGCTATCAGC GCGCAAAACT GCGGATATAT
CGCGATGCAC GATTCAGCGT GTGTAACCGT GACGACGCTG CCACATGGCC TATGACGATT
AATCCTGATG TCATGTTTGG TTTGAGTAGC AGCGAACGTG GCCTGAGCTG GAATAAAGAC
ACCGCGCATA TTTTACTGGA CGGTAAAGAC TTCCTTGATA GCCATGCCTG CATGTTGGTA
GGCGAGCATA ATATGCTCAA TATTCAAGCT GCCACTGCCA TGGCGATGTT GGCGGGTATT
GATCTTACTG CCATTAAGCT TGCAGCAACC AGCTTTGCAG GTCTGGCACA TCGCTGTCAA
ACCGTGGCGG TGAGTCATCA TGTGCGTTGG ATAAATGATT CCAAAGCAAC CAACGTTGGC
GCCACTATTG CCGCCATCGA TGGCCTATCA CCGACCTGTA AAGGCAAATT GATCCTTATC
GCGGGTGGCG ACGGGAAAGG AGCTGATTTC TCGCCACTGG AAGAGCGGTT CAACGTACAA
GTAAATGAGT TAATTACCCT AGGTAAAGAT GGTCCTAAGT TGGCTGAATT AAAGGCAAAC
AGCCATCAGG TTGCAACCTT AGACGATGCA GTGCAATTGG CTGCTACGTT AGCAGAGGGC
GACGCGACCG TGTTGCTGTC ACCTGCTTGC GCTAGCTTGG ATATGTTTAA AAACTATCAG
CAACGCGGCG ACTTATTCGT AAAAGCGGTA AACACTCTGG TAGCTAAGCA AGGAGGTCAG
CGATGA
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| Protein sequence | MAANPLANKN IIVVGLGLTG LSCVRFLVAK GANVSAVDTR ADLEVSVSVP VFLGELDSAR
LCAADMLVVS PGLSLKTPAI NAAIDAGVQV IGDIELFAMF NNTPVLAVTG SNGKSTVATL
AYEMCLAAGK KALLGGNIGI PALELLEKDA DIIVLELSSF QLETTYTLRP HVACMLNLSD
DHLDRHGDML SYQRAKLRIY RDARFSVCNR DDAATWPMTI NPDVMFGLSS SERGLSWNKD
TAHILLDGKD FLDSHACMLV GEHNMLNIQA ATAMAMLAGI DLTAIKLAAT SFAGLAHRCQ
TVAVSHHVRW INDSKATNVG ATIAAIDGLS PTCKGKLILI AGGDGKGADF SPLEERFNVQ
VNELITLGKD GPKLAELKAN SHQVATLDDA VQLAATLAEG DATVLLSPAC ASLDMFKNYQ
QRGDLFVKAV NTLVAKQGGQ R
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