| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3514 |
|---|
| Symbol | |
|---|
| ID | 4175293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4218703 |
|---|
| End bp | 4219875 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638056543 |
|---|
| Product | cell division protein FtsZ |
|---|
| Protein accession | YP_663070 |
|---|
| Protein GI | 109899815 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0206] Cell division GTPase |
|---|
| TIGRFAM ID | [TIGR00065] cell division protein FtsZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000411228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAT TAATGGATAG TCATAGCGAA GAAGCCGTCA TTAAAGTTAT TGGTGTCGGT
GGAGGTGGCG GAAACGCTAT CGAACACATG GTGTCACAAT GTATTGAAGG TGTTGAATTC
ATCGCCATCA ATACCGATGC GCAAGTTTTA CGTAGCTCAG CGGCTAACGT GACTCTGCAA
ATCGGTTCTG GTGTTACCAA AGGCTTGGGT GCAGGTGCAA ACCCTAACAT AGGCCGTGAA
GCAGCTGAAG AAGACCGCGA AACCATTCGC CAATCGCTGG AAGGTGCCGA TATGGTATTT
ATCACAGCTG GTATGGGTGG TGGTACCGGT ACAGGTGCAG CGCCTGAAGT GGCTAAAATC
GCTAAAGAGT TGGGTATTTT GACTGTAGCG GTTGTCACTA AGCCTTTTCC TTTTGAAGGC
CGTAAGCGTA CTGATTTCGC TGAACAAGGT ATCGAAGAGT TATCAAAATA CGTTGATTCA
CTGATCACCA TCCCGAACGA AAAATTACTG AAAGTCATGG GTAAAGGTAC GCCTTTACTG
CAAGCGTTCA GTGCTGCGAA TGACATTTTA AGCGGAGCGG TACAAGGTAT AGCTGAGCTT
ATTACACGTC CTGGTTTAAT CAACGTGGAT TTCGCCGATG TAAGAACCGT TATGTCAGAA
ATGGGTACGG CCATGATGGG TAGTGGCAGT GCTTCTGGTG AAGATCGCGC TGAAGAAGCT
TCAGAAGGTG CAATTGCGTG TCCATTATTA GAAGACATCG ACTTGTCTGG CGCCCGTGGT
ATTTTGGTTA ACATCACAGC TGGCCCCGAC TTCTCAATTG ATGAATTCGA AATCGTGGGT
AATGCTGTTA AGGCGTTCGC ATCTGAAAAC GCAACTGTGG TTGTGGGCAC GGTTATCGAC
ATGGAAATGT CTGATGAGCT GCGCGTGACC GTTGTGGCGA CAGGTATTGG TGCAGAGCGT
AAGCCTGACA TCTCTTTGGT ATCAAACCGC ACTTCAGCAC GTGTACCGAG TGAACAGCAA
GAAGTTCGTA TTCAAGCCAA CGGTACTGAC AATGTACAAA CCAGTGTGAC CACTGAAAGT
AGCCGTACAG TGGTGAATGA AGAAAGAACT GACTCAGGTA ATGATCTTGA ATATTTAGAT
ATTCCTGCGT TTTTACGCAA GCAAGCTGAT TAA
|
|---|
| Protein sequence | MFELMDSHSE EAVIKVIGVG GGGGNAIEHM VSQCIEGVEF IAINTDAQVL RSSAANVTLQ
IGSGVTKGLG AGANPNIGRE AAEEDRETIR QSLEGADMVF ITAGMGGGTG TGAAPEVAKI
AKELGILTVA VVTKPFPFEG RKRTDFAEQG IEELSKYVDS LITIPNEKLL KVMGKGTPLL
QAFSAANDIL SGAVQGIAEL ITRPGLINVD FADVRTVMSE MGTAMMGSGS ASGEDRAEEA
SEGAIACPLL EDIDLSGARG ILVNITAGPD FSIDEFEIVG NAVKAFASEN ATVVVGTVID
MEMSDELRVT VVATGIGAER KPDISLVSNR TSARVPSEQQ EVRIQANGTD NVQTSVTTES
SRTVVNEERT DSGNDLEYLD IPAFLRKQAD
|
|---|
| |