| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3513 |
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| Symbol | lpxC |
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| ID | 4175292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4217612 |
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| End bp | 4218526 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056542 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_663069 |
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| Protein GI | 109899814 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000120785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAC AACGTACCAT TAAACAATCT GTTCAAGAGA CTGGAATTGG TCTGCACAAA
GGTGACAAGG TCACTATGAC TCTCCGGCCT GCGCCGGCGA ATACAGGTAT TGTATTTCGC
CGCGTTGACC TTGAGCCTCA TGCGGATATT CCAGCTCGCG CCGAAGCGGT GGGTGACACG
ATGTTGTGTA CGTGTATAAC CAACGCTGAC GGTGTGTCTA TTTCCACCGT TGAGCACTTG
GCTTCAGCGC TTGCCGGCTT AGGCATCGAC AATATTATTG TTGAAGTTGA TAGTGACGAA
TTGCCGATCA TGGACGGTAG CGCTAGCCCT TTCATCTTCT TACTGCAATC TGTTGGTATT
GAGGAGCTTA ACGCCCCTAA GCAATTCATT AAGATCAAAA AAGCGATCAA AGTGAAAGAC
GGCGACAAGT GGGCAGAGTT ACGCCCGCAT GACGGTTTCC GTGTGGATTT TCGCATTGAC
TTTGATCACC CTGCGATCAG TCAGACGCGC CAACACATGG TGTTAGACTT TGATTCATCT
TCCTATGTTG ATGAAGTGAG CCGTGCTCGA ACGTTTGGTT TTATGAAAGA TCTAGAATAC
ATGAACGCCA ACAACCTTGC GCTTGGTGGC AGCATGGCGA ACGCCGTGGC TTTAGACGAA
TACCGTGTGC TTAACCCTGA AGGGTTGCGT TATAGCGATG AGTTCCTAAA GCATAAAATT
CTAGATGCCA TTGGTGATTT ATATTTAGGT GGCCACAGTA TTATCGGTGA GTTAGTTGCC
TATAAAACCG GTCACGGATT GAATAACAAA TTGCTTAATG CGTTGCTGCA GAACCAAGCT
TGTTGGGAAT TTGTCAGCTA TGACAACAGC GAAGAGCTAC CTATTAGATT CGCATCACCT
ATTTTAGCGA ACTAA
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| Protein sequence | MIKQRTIKQS VQETGIGLHK GDKVTMTLRP APANTGIVFR RVDLEPHADI PARAEAVGDT
MLCTCITNAD GVSISTVEHL ASALAGLGID NIIVEVDSDE LPIMDGSASP FIFLLQSVGI
EELNAPKQFI KIKKAIKVKD GDKWAELRPH DGFRVDFRID FDHPAISQTR QHMVLDFDSS
SYVDEVSRAR TFGFMKDLEY MNANNLALGG SMANAVALDE YRVLNPEGLR YSDEFLKHKI
LDAIGDLYLG GHSIIGELVA YKTGHGLNNK LLNALLQNQA CWEFVSYDNS EELPIRFASP
ILAN
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