Gene Patl_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3503 
Symbol 
ID4175282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4206914 
End bp4207483 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID638056532 
ProductyecA family protein 
Protein accessionYP_663059 
Protein GI109899804 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATACTG AAGAACAAAA ATACGAACAG ATTACCGCCG CGCTTCAGCG CAACAATATT 
TTGGCCAGCG CCGCAGAAGT ACAAGGCGTG TTTTGCGGCA TGCTAGGCGG TGGAATGCCG
TTAGAATCTC AAGATTGGGT TGAAGCCATT GCCGATTTTG TCAATCAGGG CGAGTCTTTG
GCAAAGGACG TACAGTCATT ACTCAACGAG TTGTACAACG AGACCTGTCA GCAACTGGTA
GAAAGCGACT TTTCTTTGGT GCTGTGCTTA CCTGATGATG CCGCCCCCAT TAACGAACGT
GGACAGGCAC TATTAGAGTG GGTTCAAGGG TTTATGCTTG GCTTTGGTTT ACATCAAGAC
GATTTAACTA AATGCTCACC GGACGTTAAA GAAGCCTTAG AAGATTTCGC CGAAATCGCG
CGTATGGACG AAGAAATGGC TGAAGGTGAA GAGTTCGAGC AGGCTCTATT TGAAGTGGTT
GAATATGTGC GTGTCAGTGC AATGTTGTGC TTTAACGAAC TGGGTAAGTC ACCTGAAGAG
CAGCAAAGCC AACCTAAGAC GGTGCATTAA
 
Protein sequence
MNTEEQKYEQ ITAALQRNNI LASAAEVQGV FCGMLGGGMP LESQDWVEAI ADFVNQGESL 
AKDVQSLLNE LYNETCQQLV ESDFSLVLCL PDDAAPINER GQALLEWVQG FMLGFGLHQD
DLTKCSPDVK EALEDFAEIA RMDEEMAEGE EFEQALFEVV EYVRVSAMLC FNELGKSPEE
QQSQPKTVH