| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3498 |
|---|
| Symbol | |
|---|
| ID | 4175277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4202361 |
|---|
| End bp | 4202969 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638056527 |
|---|
| Product | multiple antibiotic resistance (MarC)-related proteins |
|---|
| Protein accession | YP_663054 |
|---|
| Protein GI | 109899799 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000046015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT TAATCCCAGT TTTTATTTTC TTTTTTGCCG TTATCGATCC CATTGGTAGT
GTTCCCGTCT TTATTGCAAC CACCACAGGT TTTGATGCCA AAGCCAAACG CCATATTGCT
TTTAAGGCAA TCATTGCAGC GACGGGGATA TTGCTCTTTT TTATCGTCGC AGGTGAATAC
ATCTTATCTG CTATGGGGAT CCCACTCTCG GCATTTGAAA TTGCGGGAGG GATTGTATTG
TTCTTGTTCG CACTGACGAT GATTTTCGGC GAAGGTAAAG CAAGTAACGA GTTACGCATG
GCCAAGTCGA TGACTGAAAC GGCTATTTTC CCCCTAGCGG TGCCGTCTAT TGCCAGCCCA
GGCGCTATGT TAGCGGCGGT AATGCTGACT GAAAATGATC GATACACCTT GGCCGAGCAG
GCAACGACCA CAGGGGTGAT GCTAACCGTG CTCGTCATTA CCTTAATTTT ACTGATAGCA
GCAGCGCCTA TTCATCGTGT TATCGGTAAT GGTGGCGCGA ATATCGTCAG CCGCGTTATG
GGACTCATTT TGGCATCGCT AGCAACGGCC AGTATCTTAG AAGGAATTAA TACGTACTTC
TCTTTGTAG
|
|---|
| Protein sequence | MSELIPVFIF FFAVIDPIGS VPVFIATTTG FDAKAKRHIA FKAIIAATGI LLFFIVAGEY
ILSAMGIPLS AFEIAGGIVL FLFALTMIFG EGKASNELRM AKSMTETAIF PLAVPSIASP
GAMLAAVMLT ENDRYTLAEQ ATTTGVMLTV LVITLILLIA AAPIHRVIGN GGANIVSRVM
GLILASLATA SILEGINTYF SL
|
|---|
| |