| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3434 |
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| Symbol | |
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| ID | 4175211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4117046 |
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| End bp | 4118794 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056465 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_662994 |
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| Protein GI | 109899739 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCTG TAAAAACTCT TACCCTAATG CGCTGGTTAT TTGGCCAACT CGCACCCTAT
AAAACAAAGG TAATGTGTGC CATAAGCGCG CTTATTGTTG GTTCAGGCTC TTGGTTGTTA
CTGGGCCAAG GTGTGAAGGT CGTGGTCGAT GAAGGCTTTG TCGCAAATAA CGCTACCATG
TTAAATCAAA TGATGCTGGT GGTGGTGGGT ATTGCGCTAC TGGGCAGTAT TGCAGCGTAC
TTTCGATTTT ACCTAATGAT TTGGCTAGGA GAGCGCGTCA GCGCAGATAT TCGCCAATCT
GTGTACTCTC ACCTGCTAAC GTTACCTCCC GCATTTTTTG AGAGAACACG TACCGGCGAG
GTCATTTCAC GCTTTACCAG TGACACTACC GTGCTGCAGT CGGTGGTGGG TATGGGGCTG
TCAATGGCAC TGCGCGCAGG CATTACTTTT ATTGGTGCAT TATTGCTGAT GTTAATCACC
AGCCCCATGT TGACCCTGTA CGTATTGATT GCTGTGCCAA TTGTATTATT GCCAATTCGT
TTCTTTGGCG CCAAAGTGCG TTTGCATGCC AGAAACAGTC AAGACCGAGT GGCAGATTTA
GGTGCTTACG TGGATGAGTC ACTGCATGAA ATTCACACCG TTCAAGCGTA TTCTCATGAA
GATCTCGACA GAAGTAAGTT TGCCGGTCGG GTAGAAGATG TGATGACAGC GGCCAATAGC
CGCATTCGCT TTCGTGCTTT GATGATGGCC ACGATTATGG GTATCAGCAT GACCGCCATT
ACCTTAGTCG CTTGGTTAGG TGCGCAGCAG GTGTTAACTG CCAGTATTAG CGCCGGTGAG
CTTACCGCGT TTATGTTCTA TGCCGTTATG GCAGGCGGTG CGGTCGCCAC GTTAAGCGAG
GTCATAGGGG AAGTTCAAAA AGCTGCCGGA GCCAGCGAGC GTTTAATGGA GTTATTGCAT
ACCAAGAGTG AAGTACTTGA ACCTGAAACG CCCCAATTGT TAGCAAAAAA GGTGCAAGGC
AACTTAACCT TAACGGATGT GAATTTTAGC TATCCCAGTG CTGTAGACAG CCCTGCATTA
CAGCATATCT CTCTTGACAT AAAAGCTGGC GAGCGTATTG CTTTAGTCGG CCCAAGCGGC
GCTGGCAAAT CTAGTTTATT CCAACTCTTG CTGCGGTTTT ACGATATTCA ATCGGGGGAA
ATTAGTTTAG AAGGGGTGAA TATAGCTGAG CTCGAGCTAG AGTCTTTACG CCAACAATAT
GCCCTCGTAC CTCAAGAGTC AGTGATTTTT GCTAGCAGTG TTGCCGAGAA CATTCGCTAC
GGACGACCGG ATGCCAGTGA TGAAGACGTG CAAGCCGCTG CTAAAGCCGC CAGAGCCGAT
GAGTTTATTG AGCAGTTGCC GGAAGGCTAT CAAACCTATT TGGGCGAGCG AGGCGTACGT
TTATCTGGGG GGCAAAAACA GCGAATCTCT ATCGCTAGAG CAATCCTCGC TGATCGACCT
ATTTTGTTGC TGGACGAAGC TACCAGTTCA CTGGATGCAG CCAATGAGCA GTTTATCAAG
CTGGCTCTGG ACGAACTAAT GCGCGAAAAG ACCACTTTAA TTATTGCCCA CCGATTAGCC
ACAGTAATCA ATGCGGATCG CATAGTCGTG ATGGATAAAG GCCAGATAGT GGCAATAGGT
AATCATCAAG AATTAATCGC CAGTAATGCG CTTTATCGGG AATTCGCCGA GTTGCAGTTG
GTCAGTTAA
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| Protein sequence | MKAVKTLTLM RWLFGQLAPY KTKVMCAISA LIVGSGSWLL LGQGVKVVVD EGFVANNATM
LNQMMLVVVG IALLGSIAAY FRFYLMIWLG ERVSADIRQS VYSHLLTLPP AFFERTRTGE
VISRFTSDTT VLQSVVGMGL SMALRAGITF IGALLLMLIT SPMLTLYVLI AVPIVLLPIR
FFGAKVRLHA RNSQDRVADL GAYVDESLHE IHTVQAYSHE DLDRSKFAGR VEDVMTAANS
RIRFRALMMA TIMGISMTAI TLVAWLGAQQ VLTASISAGE LTAFMFYAVM AGGAVATLSE
VIGEVQKAAG ASERLMELLH TKSEVLEPET PQLLAKKVQG NLTLTDVNFS YPSAVDSPAL
QHISLDIKAG ERIALVGPSG AGKSSLFQLL LRFYDIQSGE ISLEGVNIAE LELESLRQQY
ALVPQESVIF ASSVAENIRY GRPDASDEDV QAAAKAARAD EFIEQLPEGY QTYLGERGVR
LSGGQKQRIS IARAILADRP ILLLDEATSS LDAANEQFIK LALDELMREK TTLIIAHRLA
TVINADRIVV MDKGQIVAIG NHQELIASNA LYREFAELQL VS
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