Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3428 |
Symbol | |
ID | 4175205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4107334 |
End bp | 4109946 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638056459 |
Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
Protein accession | YP_662988 |
Protein GI | 109899733 |
COG category | [C] Energy production and conversion |
COG ID | [COG1049] Aconitase B |
TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0210956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAGAAG CATATCGTAA ACATGTTGAA GAACGTTCTG CCGAAGGTAT CCCACCTAAA CCATTAAATG CCGAGCAAGT TGCTGGTTTG GTTGAGTTAT TAAAAGCGCC GCCTGCAGGC GAGGGTGACT TTTTACTTGA GTTGTTATCA GAGCGTGTTC CACCGGGCGT AGATGAAGCG GCTTATGTTA AAGCTGGTTT CTTAAATGCT ATCGTTATCG GTGAAGCATC ATCTCCTTTG ATCAGCAAAG ACGCTGCTAT CCAATTGTTG GGTAACATGC ACGGTGGTTA CAACATCGTG ACGCTAGTTG ATGCACTTGA TAACAATGAT TTGGCTGAGC TTGCTGCTGA AGAATTGAAG CACACTTTGC TGATGTTTGA TGCTTTCCAT GACGTGGAAG AAAAAGCCCG CGCAGGAAAC GCATTCGCCA AAGACGTATT ACAATCTTGG GCTGACGCCG AGTGGTTCAC TTCACGCCCT GAAATGCCTG AGAAAATCAC TTACTCAGTA TTCAAAGTGA CCGGTGAAAC AAACACCGAT GATTTATCAC CTGCACCTGA TGCATGGTCA CGTCCTGATA TTCCATTGCA CGCACGTGCA GCGTATAAGA TGACCCGTGA CGGCTTAACG CCTGAAGTAC ATGGAGAAAT TGGACCACTT AAGCAAATCG ACGAAATTAA AGCAAAAGGT CACCCTGTTG CGTTCGTGGG TGACGTTGTA GGTACCGGTT CATCACGTAA GTCAGCGACT AATTCAGTCC TTTGGTTCTT CGGTGAAGAC TTACCTGGCG TACCAAACAA ACGTGGCGGC GGTGTATGTA TCGGCGGCAA AGTTGCGCCA ATTTTCTACA ACACCATGGA AGATGCTGGT GCGTTAGTAT TTGAAGCTGA CGTAGACAAT ATGAACATGG GCGACGTGAT TGACATCTTC CCACTTGAAG GTCGTATTAC TAACGCTGAA ACAGGCGCTG AACTGGCTAA ATATGAGTAT AAGTCTGACG TATTGCTAGA CGAAGTACGC GCTGGTGGCC GTATTAACTT AATCATTGGT CGTGGTTTGA CCGAAAAAGC GCGCGAGTCT TTAGGCCTTG GTGCTTCTGA CTTGTTCCGT AAGCCAGACC AACCCGCTGA TACTGGCAAA GGGTATACCT TAGCTCAGAA GATGGTGGGT AAAGCATGTG GTGTTGAGGG TATTCGCCCA GGCACTTACT GCGAGCCTAA AATGACTACT GTGGGTTCAC AAGATACCAC TGGACCAATG ACCCGTGATG AGCTTAAAGA TCTAGCCTGT TTAGGTTTCT CTGCAGATTT AACCATGCAG TCGTTCTGTC ACACAGCGGC GTACCCTAAA CCAGTTGATA TTGATACTCA GCATACATTG CCTGATTTCA TTATGAACCG TGGCGGTGTC TCACTTCGCC CAGGTGACGG TATTATCCAC TCTTGGTTAA ACCGCATGTT ATTGCCTGAT ACCGTGGGTA CTGGTGGTGA TTCTCATACG CGTTTCCCAA TGGGTATTTC ATTCCCTGCA GGCTCTGGTT TGGTTGCATT CGCAGCTGCA ACAGGCGTAA TGCCGCTTGA TATGCCTGAG TCGGTATTGG TGCGCTTTAA AGGTAAAATG AAGCCAGGTA TCACGTTGCG TGATTTGGTG CATGCCATTC CATTGTACGG TATCAAGCAA GGTCTTTTGA CTGTAGCTAA GAAAGGTAAA GTCAATGCTT TCTCTGGTCG TATTCTTGAA ATAGAAGGTT TGAACGATTT GACCGTTGAG CAAGCGTTTG AATTGTCAGA TGCCTCTGCA GAGCGTTCAG CAGCAGGTTG TACTATTAAG TTGTCTGAAG CGTCTATCGC AGAGTACCTA ACGTCTAACA TCACTATGTT ACGTTGGATG ATCAACGAAG GTTACGGCGA CCCTCGTACG CTTGAGCGTC GTGCTCGTAA AATGGAAGAG TGGTTGGCTA ACCCAGAGCT AATGCAAGCG GATAAAGACG CTGAGTACGT TGAAACCATT GAGATTGACC TTGATGATAT CAACGAACCT ATTCTTTGTT GCCCGAACGA TCCAGATGAT GCGAAAACTT TGTCTGACGT TGCTGGCGAG AAAATTGATG AAGTGTTCAT CGGTTCTTGT ATGACGAATA TTGGTCACTT CCGTGCTGCA GGTAAACTAC TTGAGCAATA CAACAAGACC TTGCCAACGC GTTTGTGGAT CTCTCCACCG ACTAAGATGG ACAAAGCCGT ATTGATGGAA GAAGGCTACT ACAACATCTA CGGTCGTGTG GGTGTGCGTA CTGAAATGCC TGGTTGTTCA TTGTGTATGG GTAACCAAGC ACGCGTATTA GCTAACTCAA CAGTATTGTC TACTTCTACT CGTAACTTCC CTAACCGTTT AGGTGATGGT GCTGATGTTT ACTTGTGTTC TGCTGAACTT GCGGCTGTTG GTGCGATTGT TGGTCGTATC CCTACTACAG CTGAGTACAT GGAGTATGCG AACAAGATCG AGTCTATGTC TGGTGATGTT TTCCGTTACT TGAACTTCGA CCGTATCGAT GAGTTCAAGC AAGCAGAAGC TGCTGCGAAA GAGAAGATTA TTCCTGCTCT TAACATTGCT TAA
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Protein sequence | MLEAYRKHVE ERSAEGIPPK PLNAEQVAGL VELLKAPPAG EGDFLLELLS ERVPPGVDEA AYVKAGFLNA IVIGEASSPL ISKDAAIQLL GNMHGGYNIV TLVDALDNND LAELAAEELK HTLLMFDAFH DVEEKARAGN AFAKDVLQSW ADAEWFTSRP EMPEKITYSV FKVTGETNTD DLSPAPDAWS RPDIPLHARA AYKMTRDGLT PEVHGEIGPL KQIDEIKAKG HPVAFVGDVV GTGSSRKSAT NSVLWFFGED LPGVPNKRGG GVCIGGKVAP IFYNTMEDAG ALVFEADVDN MNMGDVIDIF PLEGRITNAE TGAELAKYEY KSDVLLDEVR AGGRINLIIG RGLTEKARES LGLGASDLFR KPDQPADTGK GYTLAQKMVG KACGVEGIRP GTYCEPKMTT VGSQDTTGPM TRDELKDLAC LGFSADLTMQ SFCHTAAYPK PVDIDTQHTL PDFIMNRGGV SLRPGDGIIH SWLNRMLLPD TVGTGGDSHT RFPMGISFPA GSGLVAFAAA TGVMPLDMPE SVLVRFKGKM KPGITLRDLV HAIPLYGIKQ GLLTVAKKGK VNAFSGRILE IEGLNDLTVE QAFELSDASA ERSAAGCTIK LSEASIAEYL TSNITMLRWM INEGYGDPRT LERRARKMEE WLANPELMQA DKDAEYVETI EIDLDDINEP ILCCPNDPDD AKTLSDVAGE KIDEVFIGSC MTNIGHFRAA GKLLEQYNKT LPTRLWISPP TKMDKAVLME EGYYNIYGRV GVRTEMPGCS LCMGNQARVL ANSTVLSTST RNFPNRLGDG ADVYLCSAEL AAVGAIVGRI PTTAEYMEYA NKIESMSGDV FRYLNFDRID EFKQAEAAAK EKIIPALNIA
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