Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3424 |
Symbol | |
ID | 4175201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4101210 |
End bp | 4103234 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056455 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_662984 |
Protein GI | 109899729 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.560716 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGA CTGTAGCACT GCGCGTTGTA GGTGGGTTTG CCATTATTAC TTCGCTGCTT ATCGTCATGG GAATATTTTC ACTCGCTACC TTAGATGATA TAGATGACGC TACCGAAGAC GTAAGTAATC TCGCTTTTCC GACGGTCAGC GGCAGTAGTC AACTCAAAGT GTCATTCTTA AACATGGGGC GCCTAACGGC AGAAGCCTAC TACGGTGACG GTTTAGACAG CCTTGATGAA AAAAGCGAAG CCTTTAACAA TAGCCAAAGC AACTTTGAAA ACGAATTCAA CACACTTAAG CAGGTAGTCA GCCAAGAGTC TGACTTAAAA GCCTCTTTAG CAGAAGTGGA TGGCATTTAC GAAGACTATA AGGTCAATGT CTTAAAGCTG TTTGATAGCC GTAAAGCTGA CCTTGCTATG CGCGATACAC TGCGTGGTCA AATTGGCGAT ATTGAAGATA ACGCCGATGA CACATCCTCA TTGATCTTAG ATTTCTCTGA CCTTGACGAA GTTCAAAATA ATGCCCAACT TGCCAAGGCT TCAGAATTAG CCAATCGCCT TGAAACCAAT TTAATGTCAC TTATCACAGT GAGCTCAGAA TATATTAAAA CCCAAAATTT GGTTAGGGCT GACACCCTAG GCAACGAGGT AGAACTGGTT GTAAACCAAA TTCGTGAATC TTTGAGTGGC ATTCAAAACG CAGCGGGTGG CAACGACCCT AGTGGTACCC TGTCCGAAAT CTATCAGTTG ACGGGGTCAG TCCTAGACTT GGTAAGCTCG TCAACGGGTG TGCTACAAAA CCAAGTAAAG AAGATCAACA AACAGAATGA AGCCACTGCC GCTTACAGGG CCTCAGATGC CAACATCGAG TTAGCCATTA CCAAACTTAA TACTCTGTCT AAACTTGCCG ATGATAAAGC ATCGATAGCC AATGAATCGG TCAAAAGCTC AATTAGCTCT GGCAATCTAC GAACCACATT TATTGTTATT ATCTCGGTCT TAATTGCCAG CGTAATTGCC TTCTTTGGTG TGCGAGCTAT TATCAAGCCG CTTAACAGAG TTAATGAGAT GCTGAACATT GTTTCATCAG GGGATCTTAC TCAACGTTTA GACGACTCTT CCGATGATGA ATTTGGCACT TTGGCGAAAA ACTGTAATAA CTTGGTTGAC AGCTTAAAGT CATTGATTTC AGGTATAGGC TCTCGCTCTG CTCAGTTAGC TGCCGCATCA GAAGAGACCT CTGCGGTGAC CATGCAAACC ACCACATCGA TTCAAGAGCA GAAATCACAG ATCGCGCAAG TTGCTACCGC AACAACAGAA ATGCACAGTA CGTCCTTGGT TGTCAGTCAA AGCGCTGAAG ATACATTGCG TCAAATTCAA CATGCTGATG AAGAAGCCGA GAAGGTTAAA GCTATCTCGG AAGAAAACAT TCGCACCATT GAAGTGCTCG CCCGTGACGT TGAAGAAGCG GCCGAGGTTA TTAATAAGCT TCATCAAGAC AGTGCCAGCA TCGGCGGTAT TTTGGATGTT ATTCGTGGCG TGGCTGACCA AACTAACTTA CTCGCATTAA ACGCGGCCAT TGAAGCGGCG CGCGCAGGTG AGCATGGTAG AGGCTTTGCC GTAGTAGCAG ATGAAGTACG TACCCTTGCC AGTCGCACAC AAAAATCGAC TCAAGAAATT AACTCGATGA TTGAAGTGCT TCAAGCGGGT GCTGAAAAAG CCGTAGCAGT AATGAACCAA GGCAAAGAGC AAACAACCGT TTGTGTTGAG AAAACCGAAG CCTCAACCAA AGCCTTGCAG CTCATTTCTG ATGCCGTTCA TAAAGCGTAC GATGTTAGTT CGCAAATCGC TCAAGCAGCG AAAGAACAAA ATGTGGTGTC GCAAGAAATC AGCGAGAAGC TAGAGAATAT CGTGAATATC GCCGAAGAAA CCTCTGTAGG CGCGCATCAA ACGTCTGAAT CAAGTCACGA GGTGGCCAAG CTTGCTGAAG AGCTACAAAG TTCTGTACAG CAGTTTAAGG TCTAA
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Protein sequence | MKLTVALRVV GGFAIITSLL IVMGIFSLAT LDDIDDATED VSNLAFPTVS GSSQLKVSFL NMGRLTAEAY YGDGLDSLDE KSEAFNNSQS NFENEFNTLK QVVSQESDLK ASLAEVDGIY EDYKVNVLKL FDSRKADLAM RDTLRGQIGD IEDNADDTSS LILDFSDLDE VQNNAQLAKA SELANRLETN LMSLITVSSE YIKTQNLVRA DTLGNEVELV VNQIRESLSG IQNAAGGNDP SGTLSEIYQL TGSVLDLVSS STGVLQNQVK KINKQNEATA AYRASDANIE LAITKLNTLS KLADDKASIA NESVKSSISS GNLRTTFIVI ISVLIASVIA FFGVRAIIKP LNRVNEMLNI VSSGDLTQRL DDSSDDEFGT LAKNCNNLVD SLKSLISGIG SRSAQLAAAS EETSAVTMQT TTSIQEQKSQ IAQVATATTE MHSTSLVVSQ SAEDTLRQIQ HADEEAEKVK AISEENIRTI EVLARDVEEA AEVINKLHQD SASIGGILDV IRGVADQTNL LALNAAIEAA RAGEHGRGFA VVADEVRTLA SRTQKSTQEI NSMIEVLQAG AEKAVAVMNQ GKEQTTVCVE KTEASTKALQ LISDAVHKAY DVSSQIAQAA KEQNVVSQEI SEKLENIVNI AEETSVGAHQ TSESSHEVAK LAEELQSSVQ QFKV
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