| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3423 |
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| Symbol | apaH |
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| ID | 4175200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4100013 |
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| End bp | 4100813 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056454 |
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| Product | diadenosine tetraphosphatase |
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| Protein accession | YP_662983 |
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| Protein GI | 109899728 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
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| TIGRFAM ID | [TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.79123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATT ATATCGTGGG TGATATACAG GGCTGCTTGA GTGGCCTTAA AGTCGTTTTA
AGCAAAGTAG ACTTTGCACC GGGTAAAGAC ACACTATATG CGGTTGGCGA TCTTATTGGT
CGTGGCCCTG AATCTCTAGA AACCCTCGGT TATTTGCACG GATTAGGTGA TAGTTTTCAC
ACCGTGTTAG GTAACCATGA CTTAAATTTA TTAGCAATAT TCTGCGGTGT TAGGCGCGCA
AAAAAGGGTG ACAAGCTTGA CAGCGTCATT GCTTCTGACA GGTTCGCAAA ATATTGCCAT
TGGCTACGCC AAAAGCCACT TGCTCTAAGC CTTGGAGAAA ATACATTGCT GACCCACGCG
GGCTTATATC CTAAGTGGAG TTTTGATAAA GCATTGGGCT TGAGCGATGA AATTAGCACA
GCGCTACAAG GCCCTCACTG GCAGCAATTA GTACAAAACA TGTATGGTGA CAAGCCCAAC
CGCTGGGCTG ATGACTTGAC AGGCGAGTCA AGGCAACGTT TTATCATTAA TGCATTTACT
AGAATGCGTT TCTTGGAAAA AGACCAGCGC CTTGAGTTTG AATGTAAAAC CCCACCGCAA
GATGCGCCTA AGTCCCTCAC TCCGTGGTTT AGCGTCAACA ACCCAGAATT AACAACTCAG
CAAAGAGTCG TTTTCGGGCA TTGGGCGGCT TTGAATGGCG AGACTCAAAA CAGTCACTTT
ATTGCCTTAG ATACAGGATT TGTCTGGGGA GGGCATATGA CCTTGCTTCG TGCAGATGAC
TGGTTGCGAG TGCAAAGCTA A
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| Protein sequence | MADYIVGDIQ GCLSGLKVVL SKVDFAPGKD TLYAVGDLIG RGPESLETLG YLHGLGDSFH
TVLGNHDLNL LAIFCGVRRA KKGDKLDSVI ASDRFAKYCH WLRQKPLALS LGENTLLTHA
GLYPKWSFDK ALGLSDEIST ALQGPHWQQL VQNMYGDKPN RWADDLTGES RQRFIINAFT
RMRFLEKDQR LEFECKTPPQ DAPKSLTPWF SVNNPELTTQ QRVVFGHWAA LNGETQNSHF
IALDTGFVWG GHMTLLRADD WLRVQS
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