Gene Patl_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3418 
Symbol 
ID4175195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4094239 
End bp4096446 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content45% 
IMG OID638056449 
Productorganic solvent tolerance protein 
Protein accessionYP_662978 
Protein GI109899723 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000112563 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA AGCAACCTCT TCACGTGCTC TGTTTCTCTG TGTGCTCGCT TAGCGCTGTA 
GCCCAAGAAA CATGCCCAGC ACCTGCAAAT ACTTTCGTGG TAGAGAAGCG TCTGCCAAAC
GGACAAATTC AAGTTATATC TAATATGACC TCTATTCAGC AAGATAATTT CGCAGAATTT
GAGGGAGACG TGGAAATAAC CAACAAAGAT TCACAAATTA TTGCCAATAA GGCGCAAATT
GACCGCACTA CTCAGCAATT AATTGCCACT GGGGATGTGA GCTATCAAAA CCCTCAATTG
AGCGTGACCA GCCAAAAAGT GCTTCTTAAT ACCCAGAATA ACCGCATGGA AATTGCCGAT
ACGCAATATG AATTGACCAC CCTCAATGCT CGTGGTCAAG CAGAGTTATT AGTGGTGGAC
CAAACCCAAG GCTTGGAGTT AAACGGTGTC ACGTTCTCCA CGTGCCCCAC AGGACAGGAA
GATTGGTTGG TACACGCGGA TAGTATCACA GTGAAACCAG ATGAAACCCG TGGTGTCGCG
CGCAATGCGT TCTTCTATGT GCAAGATATT CCCATATTTT ATTTACCTTA CTACTCGTTT
CCGGTGACCG ATGCCCGTGA AACCGGTTTA TTGTTCCCCC AAGTCGGCAG TAGTAGCAGC
ACAGGTTTTG CTTACGAACA ACCTTATTAT TTGAATCTAG ACCCGCAGTA CGATGCGACG
ATTACCCCTA GATACATGAC TAAGCGTGGT TTGCAGCTAA AGACAGAATT TCGATATTTG
ACTGAGAACA ACAGCGGCCA GATTGATATT GAGTACTTAC CCAACGATTC CGATTCAACG
ACCAACGAGG ATCGCTATTT TTATCGCTTC ACTCATAAAG GTGCGTTATC AGACGATTGG
GAAGTGAATG TAGATTTTAA CGGCTTAAGC GATGACAACT ATATTGTCGA TTTGGGCTCT
GATTATTACA ACTCTGCGGA TACTCACCTG TTTAGAACCC TAGGTTTGCA TTATTACTCC
GACGCACTGA ATGTTAGTTT GCAACTTAGA GATTTTGAAA TTTTAGGTGA TCACGATGAC
ACCTACCGCG CGCTGCCCGA ATTAAAACTC GATTATGTTA CCGATTTACC CGCTGGCTTT
AAATTTGATA TTCACTCTGA GCTAGCCCGT TTCGACAATG CTAATGGTAC TAGCCCTAAG
GCCACCCGCG CACATATCGC CCCGACGCTC AGCTTACCTT TAGAAAACAG TTGGGGGGAA
TTCTTAGCGG AAACCTCAAT AATGCATACG GTGTATCGCC AAGAGGATAT CGAGGGCACT
GACCTGTCTC GTGACGTGTC ACGCACCTTA GGCCAAGCAA AACTATACGG GGCCTTAGTC
TTTGAGCGTC AAGCTCATTG GTTTGGGGAT AACGTCACTC AAACGCTAGA GCCCAGAGCC
CAGTACCTTT ACACCAGTTA TGAAGACCAA TCAGATATCG GTTTGTATGA CACAACACGC
TTGTTTAACG ATTTTGCTGG ATTGTTTCGA GGGCAGGAAT TCACTGGCTT AGACCGCATC
AGCGATAAGA ATCAAGTGAC CCTAGGAGTA ACCTCTCGCA TAATAGATGA AGATAATAGG
GAACAATTTA AACTTAGCTT AGGTCAGATT TTCTATCTTG AAGACAACAA GGTCACCGCA
GCGAGTAAAG AAGATGACCG CTCAGCCTTA GCAGCAGAGT TGGACTGGCG CATCGGCAGT
AAGTGGTTAG CCCACAGTGA AGTGCAAGTA TCCACCCAAA CTGACAAAGT TGAACGAAGT
AGTGTTGGCC TTGAGTATCG GCTTGCTAGA GACAAAATGC TGCAAATCAA CCATCGATTT
GTGCGTGATT TATCTGGCGA ACAGATCAGT CAACTAGGCT TAACAGCCAG TTGGCCCATC
GCCCAAGACT GGTACTGGGT TGGGCGATGG TATCGAGATA TCGATCGTCA CCGTACCATC
GAGAGCTACA CAGGATTACA ATACGAATCG TGTTGCTGGG CATTGCGCAT CGTAGCTCAA
CGTCAATTAA CCAGTCGTTT TGATGATGAT GGCCTACAAA GTACTGATGA ATTTGATTCA
GGTATCGCGA TTCAATTCCT ATTTAAAGGA ATTGGCGGCG ATAGCTCCGG GCGCGATATG
TTAAGAGATG GATTGTTCGG CTATCGACAG CCTTATCTGT TAGATTAG
 
Protein sequence
MKIKQPLHVL CFSVCSLSAV AQETCPAPAN TFVVEKRLPN GQIQVISNMT SIQQDNFAEF 
EGDVEITNKD SQIIANKAQI DRTTQQLIAT GDVSYQNPQL SVTSQKVLLN TQNNRMEIAD
TQYELTTLNA RGQAELLVVD QTQGLELNGV TFSTCPTGQE DWLVHADSIT VKPDETRGVA
RNAFFYVQDI PIFYLPYYSF PVTDARETGL LFPQVGSSSS TGFAYEQPYY LNLDPQYDAT
ITPRYMTKRG LQLKTEFRYL TENNSGQIDI EYLPNDSDST TNEDRYFYRF THKGALSDDW
EVNVDFNGLS DDNYIVDLGS DYYNSADTHL FRTLGLHYYS DALNVSLQLR DFEILGDHDD
TYRALPELKL DYVTDLPAGF KFDIHSELAR FDNANGTSPK ATRAHIAPTL SLPLENSWGE
FLAETSIMHT VYRQEDIEGT DLSRDVSRTL GQAKLYGALV FERQAHWFGD NVTQTLEPRA
QYLYTSYEDQ SDIGLYDTTR LFNDFAGLFR GQEFTGLDRI SDKNQVTLGV TSRIIDEDNR
EQFKLSLGQI FYLEDNKVTA ASKEDDRSAL AAELDWRIGS KWLAHSEVQV STQTDKVERS
SVGLEYRLAR DKMLQINHRF VRDLSGEQIS QLGLTASWPI AQDWYWVGRW YRDIDRHRTI
ESYTGLQYES CCWALRIVAQ RQLTSRFDDD GLQSTDEFDS GIAIQFLFKG IGGDSSGRDM
LRDGLFGYRQ PYLLD