Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3418 |
Symbol | |
ID | 4175195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4094239 |
End bp | 4096446 |
Gene Length | 2208 bp |
Protein Length | 735 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056449 |
Product | organic solvent tolerance protein |
Protein accession | YP_662978 |
Protein GI | 109899723 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000112563 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA AGCAACCTCT TCACGTGCTC TGTTTCTCTG TGTGCTCGCT TAGCGCTGTA GCCCAAGAAA CATGCCCAGC ACCTGCAAAT ACTTTCGTGG TAGAGAAGCG TCTGCCAAAC GGACAAATTC AAGTTATATC TAATATGACC TCTATTCAGC AAGATAATTT CGCAGAATTT GAGGGAGACG TGGAAATAAC CAACAAAGAT TCACAAATTA TTGCCAATAA GGCGCAAATT GACCGCACTA CTCAGCAATT AATTGCCACT GGGGATGTGA GCTATCAAAA CCCTCAATTG AGCGTGACCA GCCAAAAAGT GCTTCTTAAT ACCCAGAATA ACCGCATGGA AATTGCCGAT ACGCAATATG AATTGACCAC CCTCAATGCT CGTGGTCAAG CAGAGTTATT AGTGGTGGAC CAAACCCAAG GCTTGGAGTT AAACGGTGTC ACGTTCTCCA CGTGCCCCAC AGGACAGGAA GATTGGTTGG TACACGCGGA TAGTATCACA GTGAAACCAG ATGAAACCCG TGGTGTCGCG CGCAATGCGT TCTTCTATGT GCAAGATATT CCCATATTTT ATTTACCTTA CTACTCGTTT CCGGTGACCG ATGCCCGTGA AACCGGTTTA TTGTTCCCCC AAGTCGGCAG TAGTAGCAGC ACAGGTTTTG CTTACGAACA ACCTTATTAT TTGAATCTAG ACCCGCAGTA CGATGCGACG ATTACCCCTA GATACATGAC TAAGCGTGGT TTGCAGCTAA AGACAGAATT TCGATATTTG ACTGAGAACA ACAGCGGCCA GATTGATATT GAGTACTTAC CCAACGATTC CGATTCAACG ACCAACGAGG ATCGCTATTT TTATCGCTTC ACTCATAAAG GTGCGTTATC AGACGATTGG GAAGTGAATG TAGATTTTAA CGGCTTAAGC GATGACAACT ATATTGTCGA TTTGGGCTCT GATTATTACA ACTCTGCGGA TACTCACCTG TTTAGAACCC TAGGTTTGCA TTATTACTCC GACGCACTGA ATGTTAGTTT GCAACTTAGA GATTTTGAAA TTTTAGGTGA TCACGATGAC ACCTACCGCG CGCTGCCCGA ATTAAAACTC GATTATGTTA CCGATTTACC CGCTGGCTTT AAATTTGATA TTCACTCTGA GCTAGCCCGT TTCGACAATG CTAATGGTAC TAGCCCTAAG GCCACCCGCG CACATATCGC CCCGACGCTC AGCTTACCTT TAGAAAACAG TTGGGGGGAA TTCTTAGCGG AAACCTCAAT AATGCATACG GTGTATCGCC AAGAGGATAT CGAGGGCACT GACCTGTCTC GTGACGTGTC ACGCACCTTA GGCCAAGCAA AACTATACGG GGCCTTAGTC TTTGAGCGTC AAGCTCATTG GTTTGGGGAT AACGTCACTC AAACGCTAGA GCCCAGAGCC CAGTACCTTT ACACCAGTTA TGAAGACCAA TCAGATATCG GTTTGTATGA CACAACACGC TTGTTTAACG ATTTTGCTGG ATTGTTTCGA GGGCAGGAAT TCACTGGCTT AGACCGCATC AGCGATAAGA ATCAAGTGAC CCTAGGAGTA ACCTCTCGCA TAATAGATGA AGATAATAGG GAACAATTTA AACTTAGCTT AGGTCAGATT TTCTATCTTG AAGACAACAA GGTCACCGCA GCGAGTAAAG AAGATGACCG CTCAGCCTTA GCAGCAGAGT TGGACTGGCG CATCGGCAGT AAGTGGTTAG CCCACAGTGA AGTGCAAGTA TCCACCCAAA CTGACAAAGT TGAACGAAGT AGTGTTGGCC TTGAGTATCG GCTTGCTAGA GACAAAATGC TGCAAATCAA CCATCGATTT GTGCGTGATT TATCTGGCGA ACAGATCAGT CAACTAGGCT TAACAGCCAG TTGGCCCATC GCCCAAGACT GGTACTGGGT TGGGCGATGG TATCGAGATA TCGATCGTCA CCGTACCATC GAGAGCTACA CAGGATTACA ATACGAATCG TGTTGCTGGG CATTGCGCAT CGTAGCTCAA CGTCAATTAA CCAGTCGTTT TGATGATGAT GGCCTACAAA GTACTGATGA ATTTGATTCA GGTATCGCGA TTCAATTCCT ATTTAAAGGA ATTGGCGGCG ATAGCTCCGG GCGCGATATG TTAAGAGATG GATTGTTCGG CTATCGACAG CCTTATCTGT TAGATTAG
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Protein sequence | MKIKQPLHVL CFSVCSLSAV AQETCPAPAN TFVVEKRLPN GQIQVISNMT SIQQDNFAEF EGDVEITNKD SQIIANKAQI DRTTQQLIAT GDVSYQNPQL SVTSQKVLLN TQNNRMEIAD TQYELTTLNA RGQAELLVVD QTQGLELNGV TFSTCPTGQE DWLVHADSIT VKPDETRGVA RNAFFYVQDI PIFYLPYYSF PVTDARETGL LFPQVGSSSS TGFAYEQPYY LNLDPQYDAT ITPRYMTKRG LQLKTEFRYL TENNSGQIDI EYLPNDSDST TNEDRYFYRF THKGALSDDW EVNVDFNGLS DDNYIVDLGS DYYNSADTHL FRTLGLHYYS DALNVSLQLR DFEILGDHDD TYRALPELKL DYVTDLPAGF KFDIHSELAR FDNANGTSPK ATRAHIAPTL SLPLENSWGE FLAETSIMHT VYRQEDIEGT DLSRDVSRTL GQAKLYGALV FERQAHWFGD NVTQTLEPRA QYLYTSYEDQ SDIGLYDTTR LFNDFAGLFR GQEFTGLDRI SDKNQVTLGV TSRIIDEDNR EQFKLSLGQI FYLEDNKVTA ASKEDDRSAL AAELDWRIGS KWLAHSEVQV STQTDKVERS SVGLEYRLAR DKMLQINHRF VRDLSGEQIS QLGLTASWPI AQDWYWVGRW YRDIDRHRTI ESYTGLQYES CCWALRIVAQ RQLTSRFDDD GLQSTDEFDS GIAIQFLFKG IGGDSSGRDM LRDGLFGYRQ PYLLD
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