Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3298 |
Symbol | glpT |
ID | 4175075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3958617 |
End bp | 3959990 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056329 |
Product | sn-glycerol-3-phosphate transporter |
Protein accession | YP_662858 |
Protein GI | 109899603 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00712] glycerol-3-phosphate transporter [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGTA TTTTTAAACC TGCTTCACAC CAACCTCGAC TCCCCAAAGA AGAAATAGAC AAAGAATACA AAGCCCTGCG TTGGCAAGTG TTTATCGGTA TTTTTGTGGG CTACGCTGGT TATTATTTAG TGCGCAAAAA CTTTTCTTTG GCAATGCCTT TTCTGATTGA AGAACAAGGT TTTACCAAGG GCCAGTTGGG GATTGCATTA TCGGCGGTCT CTATTGCTTA TGGCCTGAGC AAATTTTTAA TGGGCAGTGT GTCTGACCGC AGTAACCCCC GTTATTTTTT GATGACAGGA TTACTAGTAT CCTCCGGCGT AATGTTTCTA TTTGGTTTCG CCGACTGGGC TACCCAAAGT GTTGCTAGTA TCTTTGTGTT GCTGTTTATC AATGGTTGGG CACAAGGCAT GGGATGGCCA GCATGTGGGC GGACCATGGT TCACTGGTAT TCAGGAAATG AACGAGGCCG TACGGTCTCG TTTTGGAATA TTGCGCACAA TGTTGGCGGT GGCTTGATTG GTCCAATATT TATTTTAGGT ATGGCGTGGT TCAATGACTG GCACAGTGCT TTTTATATGC CAGCTGCTGC AGCAAGCTTA ATTGCCGTGT TTATCTATTT TGTAATGCGC GATACACCCC AGTCATGTGG TTTGCCGCCA ATAGAAGAGT ATCGAAACGA TTACCCTGCT CAGTATTCTC AAAGCCATGA AGAAGAACTA ACGGCAAAGC AAATATTTAT GCAGTTTGTA CTGAATAACA AATTGTTGTG GTTCATCGCT GTGGCGAATG CGTTTGTCTA TTTAATACGT TACGGCGTGC TTGATTGGGC GCCTACCTAC TTGTATGAAG TAAAAGACTT TTCATTTGAT AAAAGCTCAT GGGCTTACTT TCTTTACGAG TGGGCAGGTA TTCCCGGCAC CCTACTATGT GGCTGGATAA GCGACCGATG GTTTAAAGGT CGACGAGCAC CTGCGGCCAT ATTGTATATG TTATTGGTAT TGGTGGCAGT TGTGGTTTAC TGGTTGAACC CAGCAGGTAA TCCGACCATC GATATCGCTG CTCTCATGGC AATTGGCTTC TTGATTTATG GACCTGTCAT GCTAATCGGT TTATTCGCTC TTGAGCTGGT ACCTAAAAAG GCTGCTGGCA CTGCCGCTGG CTTAACCGGG TTATTTGGCT ATTTAGGTGG AGCAGTTGTA GCCAATATTG CGCTTGGCTA TACGGTTGAC CATTTCGGCT GGGACGGTGG CTTTGTATTA TTGGTTGGCG GTTGCATAGG CGCTATTTTA CTTATCGCGT TAACCTTAAA ACACGAAGTC GCACATGAAA GTCATCAGCG GGAAGAAGGC GCTCAACTCC AAGAAAGTCA ATAG
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Protein sequence | MFGIFKPASH QPRLPKEEID KEYKALRWQV FIGIFVGYAG YYLVRKNFSL AMPFLIEEQG FTKGQLGIAL SAVSIAYGLS KFLMGSVSDR SNPRYFLMTG LLVSSGVMFL FGFADWATQS VASIFVLLFI NGWAQGMGWP ACGRTMVHWY SGNERGRTVS FWNIAHNVGG GLIGPIFILG MAWFNDWHSA FYMPAAAASL IAVFIYFVMR DTPQSCGLPP IEEYRNDYPA QYSQSHEEEL TAKQIFMQFV LNNKLLWFIA VANAFVYLIR YGVLDWAPTY LYEVKDFSFD KSSWAYFLYE WAGIPGTLLC GWISDRWFKG RRAPAAILYM LLVLVAVVVY WLNPAGNPTI DIAALMAIGF LIYGPVMLIG LFALELVPKK AAGTAAGLTG LFGYLGGAVV ANIALGYTVD HFGWDGGFVL LVGGCIGAIL LIALTLKHEV AHESHQREEG AQLQESQ
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