Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3274 |
Symbol | |
ID | 4175051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3926007 |
End bp | 3928475 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056305 |
Product | glycosyltransferase 36 |
Protein accession | YP_662834 |
Protein GI | 109899579 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3459] Cellobiose phosphorylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGC CGTCCACTGA TGCCATGAAT ACCGAATTTG GCTATTTTGA TGATCAGCAA AAAGAATATG TCATTTCCAC GCCGTTTACG CCATCCCCAT GGATAAACTA CCTAGGTAAC GATGGGTTTT ACGGGTTAAT TTCGAATACT GCTGGTGGCT ATAGTTTTTA TCAAGATCCC AAGTTTCGCC GTTTAACGCG TTATCGCTAT AACAGTGTGC CCGTCGATAC GTCAGGCCGT TATTTCTACT TAAAATGTGA TGATGAGATT TGGTCTGCCT CGGGCCGACC TGTGGCTAAC CAACCCGAAA AATACCAATG CCGACATGGT ATGGGTTACA GCCGTTTTCT CGTGAGTCAC CAAGGGATCA ATTCTGAACT TACTTGCTTT GTACCTTTAG GTGAAAAGGC TGAAGTGCAT CGATTGACCC TTAAAAATAC TGGCGCTAGG CACCGAAAAA TCAGTTTGTT TTCTTATATC GAGTGGTGTT TGTGGAACGC CGAGGATGAC GGCACTAATT TTCAACGGAA TTTGTCCACT GGTGAAGTGG AAGTAGAAGA CGGTGTTATT TATCACAAAA CCGAATACCG CGAGCGCCGA GATCACTATG CATTTTACTC GGTTAATCAA CCCATCAACG GGTTTGATAC CGACAGAGAG CATTTTTTAG GGCCTTATCG AGGTGTTGAA AACCCCTTAT GCGTTGAACA GGGCCAGTCT GCGAATTCTC ATGCCCATGG CTGGTCGCCT ATCGCTTCAC ATCATGTAGA AGTCGAGTTA GCGCCGGGTG AAGAGCGTAC CCTAGTGTTT GTTTTGGGTT ACTGTGAAGT GGAAAAAGCT CAAAAATGGC TATCTCCAGG GGTCATCAAT AAAACGCCGG CGCAAGAACT GATCAAGCGC TACGCCGATA ACCACAGTGT GCAACGGGCG TTAGATCATT TGGCGACACA CTGGGACACC TTGTTGGGTA ACTTTCAAAT TAACAGCCCA GACAGAAAAT TTAATCGCTC ACTTAATATC TGGAATCAAT ATCAGAACAT GGTGACTTTT AATTTGTCAC GCAGCGCTTC ATTTTATGAA TCAGGGATCG GGCGCGGCAT GGGCTTTCGT GATTCAAATC AAGATACCAT TGGTTTTGCC CATATGGTGC CGGATAAGGT CAAAGAGCGA ATTTTAGATC TCAGTGCGAC GCAAAAATCA GACGGCTCGG CATATCATCA GTATCAGCCT CTGACTAAAA AAGGTAATGC CAATATAGGT GGCAACTTTA ACGATGATCC CATGTGGATG GTGTTATCAA CGGTTAATTA TATTAAAGAG ACGGGGGATT TTTCGATTCT CACTGAAAAG GTGGGGTTTG ACGGTGATGA AACTGGGGAG CCAGACCATT TTGAACATTT GAAGCGTGCT TTCGAGCATG TGGTTAACAA CCTTGGGCCC CATGGGTTAC CGTTAATTGG CCGAGCAGAC TGGAATGATT GCTTAAACCT TAATTGTTTT TCTGACGATC CAAACGAATC CTATCAAACC ACCCAGCGCG GTAAGTCTGA CGTTGCAGAG TCTTTGATGA TCGCGGGCCA GTTTGTGCTT TACGGTCAAG ATTTTGTGCA ACTCTGCTTG CAACTAGGCA AGGCTGAACT GGCCCATTAT GCACAAAAGC AAGTCGATGC AATGCGCGAT GCTGTGCTCA AGCATGGTTG GGATGGGGAG TGGTTTTTGC GGGCCTACAA TGCCAAGGGC GAAAAAATAG GCAGTCACGA AAATAAAGAA GGCCAAATAT TCATAGAATC TCAAGGGTTC TGCGTGATGG CAGGAATTGG CATGCAAGAT GGCAAGGCAC GCCAAGCACT CGATTCTGTT GGAAAACGAT TAGCCACGCC TCACGGCATC ATGCTGAACC AACCAGCGTT TAGCGAGTAC GATAAATATT TGGGGGAGAT ATCTTCATAC CCGCCCGGTT ATAAAGAGAA CGCGGGCATA TTTTGTCATA ACAATCCGTG GATCATGGTG GCAGAGGCCA TGCTAGGGCG GGGCGATAAA GCACTCGAAT ATTTTTCCAG TATTTCGCCT GCTTACTTGC AAGACGTTAA AAGCCTGCAT AAAACAGAGC CCTATGTGTA CAGCCAGATG ATTGCTGGGA CTGATGCTGC AACGCCGGGC CAAGCTAAAA ACTCATGGCT AACGGGTACA GCGGCTTGGT GCTATTACGC GGCCAGCCAA TATATATTGG GCATTAAACC GGACTATGCG GGCTTAACGA TAGCGCCTTG CATTCCTGCT GATTGGCCTA GCTTTGCTGT GTCGCGCCGC TTCAGAGGTG CGCATTATAG TATTGAGGTA CGTAATCCCG ATGGCCTTGG GTCAGGCAAG GTGCAGCTAG AAATTGATGG TAAAAAAGTG CAGGGCAATC TCGTTGATTA CAGTCAATTC AACGGTGAGC ATCACGTGAT CGCGACAATC GTCGGTTAA
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Protein sequence | MIEPSTDAMN TEFGYFDDQQ KEYVISTPFT PSPWINYLGN DGFYGLISNT AGGYSFYQDP KFRRLTRYRY NSVPVDTSGR YFYLKCDDEI WSASGRPVAN QPEKYQCRHG MGYSRFLVSH QGINSELTCF VPLGEKAEVH RLTLKNTGAR HRKISLFSYI EWCLWNAEDD GTNFQRNLST GEVEVEDGVI YHKTEYRERR DHYAFYSVNQ PINGFDTDRE HFLGPYRGVE NPLCVEQGQS ANSHAHGWSP IASHHVEVEL APGEERTLVF VLGYCEVEKA QKWLSPGVIN KTPAQELIKR YADNHSVQRA LDHLATHWDT LLGNFQINSP DRKFNRSLNI WNQYQNMVTF NLSRSASFYE SGIGRGMGFR DSNQDTIGFA HMVPDKVKER ILDLSATQKS DGSAYHQYQP LTKKGNANIG GNFNDDPMWM VLSTVNYIKE TGDFSILTEK VGFDGDETGE PDHFEHLKRA FEHVVNNLGP HGLPLIGRAD WNDCLNLNCF SDDPNESYQT TQRGKSDVAE SLMIAGQFVL YGQDFVQLCL QLGKAELAHY AQKQVDAMRD AVLKHGWDGE WFLRAYNAKG EKIGSHENKE GQIFIESQGF CVMAGIGMQD GKARQALDSV GKRLATPHGI MLNQPAFSEY DKYLGEISSY PPGYKENAGI FCHNNPWIMV AEAMLGRGDK ALEYFSSISP AYLQDVKSLH KTEPYVYSQM IAGTDAATPG QAKNSWLTGT AAWCYYAASQ YILGIKPDYA GLTIAPCIPA DWPSFAVSRR FRGAHYSIEV RNPDGLGSGK VQLEIDGKKV QGNLVDYSQF NGEHHVIATI VG
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