| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3263 |
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| Symbol | |
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| ID | 4175040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3911681 |
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| End bp | 3914350 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056294 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_662823 |
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| Protein GI | 109899568 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAA CAAATTCATC AGCAGCGTCA ACAAACGCTA ATCCCTCATC TTTGCAGCAG
CATACGCCTA TGATGCAGCA GTATTTGAAA ATTAAAGCTG AACATCCTGA TATTCTATTG
TTTTATCGCA TGGGAGATTT TTATGAATTG TTCTTTGACG ATGCTAAAAA AGCCGCCGAA
CTACTCGATA TCTCCCTAAC TGCCAGGGGG AAATCAGGCG GCAATGCCAT CCCTATGGCA
GGCGTTCCTT ATCATGCGGT AGAAAATTAT TTGGCTCGAC TAGTGAAAAT GGGCCAGTCA
GTCGCTATCG TCGAACAGGT GGGTGACCCC GCAACCAGCA AAGGGCCTGT TGAGCGAAAA
GTGCAACGTA TTGTTACCCC AGGTACAGTA TCAGACGAGG CACTCCTTAA TGATAAACAA
GACAGTATAT TAGCCGCAGT TTTTTGCCCC ACGCAAAAAG CAAATCAAGA ATTGATATTC
GGGTATGCCA CCTTAGATGT AACCAGCGGT CGCTTTACGC TATGTGAGCT CAGTGGTGAG
GAAGCTCTCG CTGCCGAGTT ACAACGCACG AATCCTGTCG AGCTTTTATA CCCTGACGAT
TTTGCCTACA GTCATCTTAT CAATCAGCGA AAGGGTTTAC GCCGTCGCCC GCAGTGGGAG
TTCGATTTAC AAACCGCCAC TAACCAGCTT ACTAGCCAGT TTGGTACCAA TGAGCTATCT
GGTTTTGGCG TGCAAAACCA CCAAGTCGGT ATTTGTGCTG CAGGTTGCGT AATGCAATAT
ATCAAAGACA CCCAGCGCTC AGCCCTGCCC CACATTGACC GAATAGTGCT TGAATCCCAC
AACGACACAG TCGTGATGGA CGCCGCCACA CGGCGTAACT TAGAGCTAAC GTTTAATTTA
TCTGGTGGTA TTGAAAACAC GCTCGCGAGT ATTCTTGATA AAACCTCAAC GCCTATGGGC
AGTCGTTTGT TGCAACGATG GATCCACCGT CCGTTAACAG ATGTCACCGT GCTTAAAAAA
CGTCAACGAA ATATTCAAGG GTTGATGGAG TCACCCTATA CCCAGTTACA AAGTGCCCTG
AAAAAAATAG GTGACATGCA GCGCGTGTTA GCAAGGCTTG CGCTGCGCAG TGCTCGTCCG
CGGGATTTTG CCCGCCTGCG CCAAGCCTTT GCACTATTGC CAGATATACA ACATTATCTT
GAGCACGAAA TTAGTCATAC TAGCGAAAGC GCTCAGCCAA GCGATTTACT TCACTTGGCA
GAAAAAATCA GTCAATACCC TGACTTCGCA GACTTGTTAG AACGTGCAGT CATTGAAGCC
CCCCCAGTAT TAATCCGCGA TGGTGGGGTC ATAAAAGAAG GTTACAACGA AGAGCTTGAT
CGCCTACGTG AACTGTCAAA AGGGGCGACC GACTATTTAG AAGAATTAGA GCTACGCGAA
AAAGAGCGTA CTGGCATCGC GAGCCTCAAA GTGGGCTACA ACCGAGTGCA TGGTTACTTT
ATTGAAGTCA GCCGCAGTCA ATCTGACCTC GTGCCTGTAG AGTATGTTCG TCGCCAAACG
CTGAAAAATA ACGAACGTTA CATTATCCCA GAACTCAAAG AGCACGAAGA CAATGTGCTT
AGCAGCCAAA GTCGCTCATT AGCCCTTGAA AAGCGCTTAT ACGATGAGCT TTTCGATTTA
CTCTTACCGC AATTAACACA ACTAATGCAA AGTGCTGATG CACTAGCAGA ATTAGATGTA
CTCACTAATT TAGCCGAGCG CGCTGAAAGC CTTGATTATC ACCGCCCAGA ATTATGCCCC
CAAAGCGGCA TTCACTTTAG TCAAGGTCGC CACCCTGTTG TAGAGCAGGT ATCAGATGCC
CCCTTTATCG CCAACCCAAT TAACGTTAAC CCAGATCGCA GAATGTTGGT GATCACCGGC
CCGAACATGG GCGGTAAATC AACGTACATG CGTCAAACCG CCCTCATCGT GTTGATGGCC
TATATCGGCA GCTATATACC TGCGCAAGAT GCTCAGATTG GCCCGATAGA CCGCATATTT
ACCCGCATTG GTGCTTCCGA CGATTTAGCC TCTGGCCGAT CCACCTTCAT GGTAGAAATG
ACCGAAACCG CTAACATTTT GAACAACGCC ACGGCGAATA GCTTGGTATT AATGGATGAA
ATTGGCCGAG GTACCAGTAC CTATGATGGC CTTTCTTTAG CGTGGGCCTG CGCTGAGTAT
TTAGCGACCA AGCTGCAGTC TTTCACCTTA TTTGCTACCC ATTACTTCGA GTTAACAGGG
CTAGCGGATG CATTGCCAGA GTTAGCCAAT GTGCATCTAG ATGCCGTTGA GCACGGTGAA
AGCATTCGTT TTATGCACGC AGTGCAAGAT GGTGCAGCCA ATAAAAGCTA TGGTTTGCAA
GTAGCTCAAC TCGCAGGCGT GCCGAAATTA GTGGTACAAG CGGCTAAACG CAAATTACAT
GAACTTGAAA CGGGTGATAT TTCCAAACAA GGTCGACAAG AGACATCGCC AGTCAATACA
GTTTATGCAA CAGAAAAAGT AGAGACGCAG CTGGACTTGC TCAGTCAGAC AAGCGAAGCC
GAAGACTTAC TGCACAGTAT TCAGCCCGAT GATTTAACGC CTAAGCAGGC CCTTGATTAC
TTGTACCAAC TAAAAAAATT GGTTCGATAA
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| Protein sequence | MPKTNSSAAS TNANPSSLQQ HTPMMQQYLK IKAEHPDILL FYRMGDFYEL FFDDAKKAAE
LLDISLTARG KSGGNAIPMA GVPYHAVENY LARLVKMGQS VAIVEQVGDP ATSKGPVERK
VQRIVTPGTV SDEALLNDKQ DSILAAVFCP TQKANQELIF GYATLDVTSG RFTLCELSGE
EALAAELQRT NPVELLYPDD FAYSHLINQR KGLRRRPQWE FDLQTATNQL TSQFGTNELS
GFGVQNHQVG ICAAGCVMQY IKDTQRSALP HIDRIVLESH NDTVVMDAAT RRNLELTFNL
SGGIENTLAS ILDKTSTPMG SRLLQRWIHR PLTDVTVLKK RQRNIQGLME SPYTQLQSAL
KKIGDMQRVL ARLALRSARP RDFARLRQAF ALLPDIQHYL EHEISHTSES AQPSDLLHLA
EKISQYPDFA DLLERAVIEA PPVLIRDGGV IKEGYNEELD RLRELSKGAT DYLEELELRE
KERTGIASLK VGYNRVHGYF IEVSRSQSDL VPVEYVRRQT LKNNERYIIP ELKEHEDNVL
SSQSRSLALE KRLYDELFDL LLPQLTQLMQ SADALAELDV LTNLAERAES LDYHRPELCP
QSGIHFSQGR HPVVEQVSDA PFIANPINVN PDRRMLVITG PNMGGKSTYM RQTALIVLMA
YIGSYIPAQD AQIGPIDRIF TRIGASDDLA SGRSTFMVEM TETANILNNA TANSLVLMDE
IGRGTSTYDG LSLAWACAEY LATKLQSFTL FATHYFELTG LADALPELAN VHLDAVEHGE
SIRFMHAVQD GAANKSYGLQ VAQLAGVPKL VVQAAKRKLH ELETGDISKQ GRQETSPVNT
VYATEKVETQ LDLLSQTSEA EDLLHSIQPD DLTPKQALDY LYQLKKLVR
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