Gene Patl_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3226 
Symbol 
ID4175003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3876057 
End bp3877016 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content44% 
IMG OID638056257 
Producthypothetical protein 
Protein accessionYP_662786 
Protein GI109899531 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000103936 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAAAC ATAGCAAATA CAGGAAAAAT AGTGGCGCTG CATTGTTAGC AGTGTTGATA 
GTTTCTGTGG TTATGGTGAT ATTATTGGGC GTAGCGACCA CTACCTTGAA CAGTCGCCTA
GCGTTAGCTG ATCAATCTAA GCAAATGCTA CATGATTTGG CTCAAGTCTA CGCAAAAGAA
AATCAGCTAA CATACCTTAT TGCCACGCAA AGGGTAACAG AGGCTGGGCT GAGTCAAGGG
ACAGAGCCAC AAGGTTTATT AAGTGATGAT GAAGGTCATT GGTTATATCG AGTGATAGGC
GACGAAATCA GAGCCGATGG TGAAACTATC AAACAAGAAG ATGGGTTGAG TTTTTCGTTG
CAAAACGAGG CTGGGCTTAT CCCAATTAAC TCGTCGACTC AATACTGGTT AAAGCGATAT
TTAAGAGATA CTGGGTATGA CGCAGTACAG CAATCATATT TAGGAGATAT ACTAGCGGAT
TACGCTGATG CTGATAATTG GCGTCGCCCG GCAGGCGCAG AGCGCAGCAG TTATAAAGGT
AGGCTATTTC AGGAGCCTGC TAATTTTTTG CTTCAAAGCT GCACGGAGTT AAGAAAACTA
ATGCGTTGGG ATGAATTATT GCAGCGCGCT CCTCAATTTT TGACCTTTTG TAGCCTCAGT
CGCAGTGAAA CAATCAATCT AAATGCGATG CCTATCGCAC TGTGGGAGCT TTTTTGGCCA
AACAGCGCCA AGAAAGTTGA ATCGTTACGT GACCAAGGAC GGTGGCTAAC CAGTGTATCC
GACATGTTTG CAGTAGAGCC TTCTTTATCA GTAGAGATTG ACGATTATTT TTCCAGGTTA
GGGGGCAGCC AATTCATAGT ATTGGTTAAA AAGGGAGCTG TAAGCTCCAA CCTCAAAGTA
GAACGTGGCC GGGGCTCAGT TGCGCCTTAC ACAATCAGAC GTTATGCAGA GAAACCTTGA
 
Protein sequence
MIKHSKYRKN SGAALLAVLI VSVVMVILLG VATTTLNSRL ALADQSKQML HDLAQVYAKE 
NQLTYLIATQ RVTEAGLSQG TEPQGLLSDD EGHWLYRVIG DEIRADGETI KQEDGLSFSL
QNEAGLIPIN SSTQYWLKRY LRDTGYDAVQ QSYLGDILAD YADADNWRRP AGAERSSYKG
RLFQEPANFL LQSCTELRKL MRWDELLQRA PQFLTFCSLS RSETINLNAM PIALWELFWP
NSAKKVESLR DQGRWLTSVS DMFAVEPSLS VEIDDYFSRL GGSQFIVLVK KGAVSSNLKV
ERGRGSVAPY TIRRYAEKP