Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3226 |
Symbol | |
ID | 4175003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3876057 |
End bp | 3877016 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638056257 |
Product | hypothetical protein |
Protein accession | YP_662786 |
Protein GI | 109899531 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000103936 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAAAC ATAGCAAATA CAGGAAAAAT AGTGGCGCTG CATTGTTAGC AGTGTTGATA GTTTCTGTGG TTATGGTGAT ATTATTGGGC GTAGCGACCA CTACCTTGAA CAGTCGCCTA GCGTTAGCTG ATCAATCTAA GCAAATGCTA CATGATTTGG CTCAAGTCTA CGCAAAAGAA AATCAGCTAA CATACCTTAT TGCCACGCAA AGGGTAACAG AGGCTGGGCT GAGTCAAGGG ACAGAGCCAC AAGGTTTATT AAGTGATGAT GAAGGTCATT GGTTATATCG AGTGATAGGC GACGAAATCA GAGCCGATGG TGAAACTATC AAACAAGAAG ATGGGTTGAG TTTTTCGTTG CAAAACGAGG CTGGGCTTAT CCCAATTAAC TCGTCGACTC AATACTGGTT AAAGCGATAT TTAAGAGATA CTGGGTATGA CGCAGTACAG CAATCATATT TAGGAGATAT ACTAGCGGAT TACGCTGATG CTGATAATTG GCGTCGCCCG GCAGGCGCAG AGCGCAGCAG TTATAAAGGT AGGCTATTTC AGGAGCCTGC TAATTTTTTG CTTCAAAGCT GCACGGAGTT AAGAAAACTA ATGCGTTGGG ATGAATTATT GCAGCGCGCT CCTCAATTTT TGACCTTTTG TAGCCTCAGT CGCAGTGAAA CAATCAATCT AAATGCGATG CCTATCGCAC TGTGGGAGCT TTTTTGGCCA AACAGCGCCA AGAAAGTTGA ATCGTTACGT GACCAAGGAC GGTGGCTAAC CAGTGTATCC GACATGTTTG CAGTAGAGCC TTCTTTATCA GTAGAGATTG ACGATTATTT TTCCAGGTTA GGGGGCAGCC AATTCATAGT ATTGGTTAAA AAGGGAGCTG TAAGCTCCAA CCTCAAAGTA GAACGTGGCC GGGGCTCAGT TGCGCCTTAC ACAATCAGAC GTTATGCAGA GAAACCTTGA
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Protein sequence | MIKHSKYRKN SGAALLAVLI VSVVMVILLG VATTTLNSRL ALADQSKQML HDLAQVYAKE NQLTYLIATQ RVTEAGLSQG TEPQGLLSDD EGHWLYRVIG DEIRADGETI KQEDGLSFSL QNEAGLIPIN SSTQYWLKRY LRDTGYDAVQ QSYLGDILAD YADADNWRRP AGAERSSYKG RLFQEPANFL LQSCTELRKL MRWDELLQRA PQFLTFCSLS RSETINLNAM PIALWELFWP NSAKKVESLR DQGRWLTSVS DMFAVEPSLS VEIDDYFSRL GGSQFIVLVK KGAVSSNLKV ERGRGSVAPY TIRRYAEKP
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