| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3218 |
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| Symbol | |
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| ID | 4174995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3864632 |
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| End bp | 3867340 |
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| Gene Length | 2709 bp |
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| Protein Length | 902 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056249 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_662778 |
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| Protein GI | 109899523 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0552261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA CAGCGCAATT TGTAATCGAG CAATACACTG CAGGTTTTTT GTCCGGCTGG
TACTACGAAA ACTCTTCGCT TCCAACAGCA AAATGCTTTC AAATTGAAGT CAATGGTCTC
GTGGTGGGAG TGGGTGAAAC GAGCATTTTT CGTCAAGATT TAAAAAATGC AGGTTACGGC
GACGGTGTTC AGGCATTCAG AATATTTATT GATGACAAAC TAGTTGAGTA CGGAAAGTTA
GCCCTAAGGC TTCGAAATCA AAGTGGAAGC TATGCAGCGG GGAACACCTT TGAGTTTACT
CGAGAAGAAC CAAATATCAC CTTGGCTCTA CGAAACCGAG ACCCGCTTAA TTTACATTTT
GATGTTTTAG GCGATAAAGA AAAACTTAGT TCAAGGATCC AAATAAATGC CGGCAATAAA
GTTTTGCACT TACAAAGTAC TCAATCGAGT GTAAAAACAG GCAAAATCAA TATTCCTGCA
CCAATTGAAT TAATGGATGG CGTCGAACGG CTGATCACAA TAGGATTAGA GGGCAGCTCT
CGTGCACTGT GGCAAGGGCA TATCACTTTC TATCCAGTCG TATCCTCACG TGAAAAACTA
ACAAGCGCTC ACCCCGCCCA CCGACAAATC GGTATTAATG CGCAATCTTC TTATCGTTAC
GAATCCCTTC AATTACAACT AGCACAATCA TCAAGTTTAG AAGCGATAAA GAATATTCAA
TTAGCACACA AAGTTGTCAA CGAAGGTTGG GAAAATCGCT GCGAATTTCC CCAATTGGCT
CTACCAAAAG CAGATTCCCC TCTAGTCAGT GTTGTAATCC CTGCGTATAA CCAATTTGCA
ATAACCTATC ATTGCATTGC TTCATTAATT CTGGCTTACA ATCACGTTTC ATTTGAGGTC
ATATTGGCAG ACGATTGCTC AAATGATCGC ACCAATGAGG CTGAACAATA CATAGAACAT
CTACAAATTT GTCGTAACGA TTCAAATCTT ATGTTCTTAA AAAACTGTAA TAAAGCCTCT
CAGATGTGTA AAGGCGAATA TATCGTCTTG CTAAATAATG ACACGGAAGT GACCTCTCAT
TGGTTAGACG AGTTAGTATC AACAATGACC TTACATAGCC AATGTGGACT CACAGGAAGC
AAGTTACTTA ATCAAAACGG TAGTTTGCAA GAAGCTGGTG GAATAGTATG GTCGTCGGGT
AAACCATGGA ATGTCGGGCA TGGCGATAAC CCAAACAAAC CAGAGTACAA CTATGTTCGT
CACGTCGATT ATGTAAGTGG CGCATCATTA TGCATTAGAC GTGATGTATG GACACAAGTA
TCAGGATTTA ATGAAGACTA CGCCCCTGCC TATTTTGAAG ACACAGACAT CGCATTTAGA
GTAAGAGAAG CGGGCTATTC AACCCTTTAC ACACCAAGCT CAGAGGTGTT TCATTTTGAA
GGACTTACCC ACGGCAGAGA CATAAACGTG GGCGTAAAGC AGAATCAGGT CATAAACCAA
ACTAAATTTG CTAGGCGTTG GGTTGATGCA GTTCAACACA ATGGACATGA ATCAATTGAA
AACTTGCAAC AAGAGAAAGA CCGAAATATT CAAAAACGTG TTTTGGTTCT GGACTTCACT
GTACCCTCGC CAAATGAAGA AGCTGGCGCT TACGCCGCAG TGCAAGAAAT TAAGCTTATG
CAGTCACTTG GGTGCAAAGT AACCTTTGCT GATTACCGTT TTTTGCATAT GGGTGAGCTA
ACCACCGATC TACAAAAAAT GGGGGTAGAG GTACTGCATG CACCATTCTA TACCTCAGTG
GAACAAATGC TGACTCAACG CCTACCTGAA ATGGATGCGG TTTACATTAC TCGCTATTAT
GTTGCGCAAA AGTTTGTTGA TAGGATCAAG TCGATTAATC CAGCCTTACC TATCTTGTTC
AACAATGCGG ATCTGCATTT TTTAAGAGAG CTCAGAGCCG CCCAAACCGA GCAACAAAAG
ACGAAAGCAC GTGACCAAGA ATTAGAGATC TGTCAAAAAG TTGATGCGGT TCTGTGTTAC
AACGCGGTGG AACATGCAGT TATCAGTTCA CATATTACGG AAAAACTGAA TTATCACATC
ACTCCGTGGG TACTTAACGA GAAAACAAAA GGACCAGAAT TCAGCCTACG ACACGGTATC
TCATTTTTAG GTGGCTTTGG TCATAAACCT AATATCGACT CAGTAATATA TCTAGCTGAA
AAAGTGATGC CATTATTGCT AAGTGAAAGA CCCGATATAA AACTCAATGT GTATGGCAGT
AAGATGCCCC CCGAGCTTAA AAAGCTTGAT TGTGAAAACA TTAATATCGT GGGCTTTGCA
GCGAACCTAG ACGATGTTTT CCATCAGCAT AAGGTGTTCG TTGCCCCATT GCTTTCTGGC
GCAGGGATAA AAGGTAAGGT TCTCGAGGCC ATGGCATACA ATTTACCTTG CGTATTGACT
GATATCGCCG CTGAAGCGAC TGGGCTGAGC GATCAAATAT CTTGCTCAAT TGCTAACACG
CCCGAAACAA CTGTAGAAAA AATCATCGAG CTATACGATA ACGAAAAGCT CTGGAATCAA
TATGCCGCAG CCGAGCGAAA AATTGTCACA ACCCATTATT CTGCCAGCAA CGCGCGCGAA
AGATTTGCCG ATATTTTTGC CAGCGTAGGT GTCTTCGTCG ACGTGAAAAA CATGCACAGC
AGTAACTAA
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| Protein sequence | MSETAQFVIE QYTAGFLSGW YYENSSLPTA KCFQIEVNGL VVGVGETSIF RQDLKNAGYG
DGVQAFRIFI DDKLVEYGKL ALRLRNQSGS YAAGNTFEFT REEPNITLAL RNRDPLNLHF
DVLGDKEKLS SRIQINAGNK VLHLQSTQSS VKTGKINIPA PIELMDGVER LITIGLEGSS
RALWQGHITF YPVVSSREKL TSAHPAHRQI GINAQSSYRY ESLQLQLAQS SSLEAIKNIQ
LAHKVVNEGW ENRCEFPQLA LPKADSPLVS VVIPAYNQFA ITYHCIASLI LAYNHVSFEV
ILADDCSNDR TNEAEQYIEH LQICRNDSNL MFLKNCNKAS QMCKGEYIVL LNNDTEVTSH
WLDELVSTMT LHSQCGLTGS KLLNQNGSLQ EAGGIVWSSG KPWNVGHGDN PNKPEYNYVR
HVDYVSGASL CIRRDVWTQV SGFNEDYAPA YFEDTDIAFR VREAGYSTLY TPSSEVFHFE
GLTHGRDINV GVKQNQVINQ TKFARRWVDA VQHNGHESIE NLQQEKDRNI QKRVLVLDFT
VPSPNEEAGA YAAVQEIKLM QSLGCKVTFA DYRFLHMGEL TTDLQKMGVE VLHAPFYTSV
EQMLTQRLPE MDAVYITRYY VAQKFVDRIK SINPALPILF NNADLHFLRE LRAAQTEQQK
TKARDQELEI CQKVDAVLCY NAVEHAVISS HITEKLNYHI TPWVLNEKTK GPEFSLRHGI
SFLGGFGHKP NIDSVIYLAE KVMPLLLSER PDIKLNVYGS KMPPELKKLD CENINIVGFA
ANLDDVFHQH KVFVAPLLSG AGIKGKVLEA MAYNLPCVLT DIAAEATGLS DQISCSIANT
PETTVEKIIE LYDNEKLWNQ YAAAERKIVT THYSASNARE RFADIFASVG VFVDVKNMHS
SN
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