Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3207 |
Symbol | |
ID | 4174984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3849839 |
End bp | 3851569 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638056238 |
Product | glycosyl transferase family protein |
Protein accession | YP_662767 |
Protein GI | 109899512 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTGG TAAAATATGT CGTAGGCCTA TTTCCAGAAA AAACTCGGAA GCACATGCGG CAGCAGCTTT GGTTGTTCAA CCTATACAGT CGAAGTCTAC AAAAGTCTGG CTTGTTTTAC GGTTTTCCTT CCCCTCTGAA ATTGCAAAAA CTCTATTGCA AAGCAATTGT AAAACAAGCT ATTGAAATGG CTGACATATG TGAAAATAAG TTTGCAGATG AAAAGCTGAG TACTCTCGTG ACCCTTAGTG GTCAGGTTGA CGCCGATCGC AATACCTTAT CTTCACTTAT AACGAACTCA GCGGTTAGTG CTATTTACCT CCAGGGGCAG AGTGCTGATG TTAGTCGTCT TTTAGAAGAG TTTTCTCATT CCTCCACGAA AGAACTTGGT GCATTGGACG ATTTAATAAA GTCAGAAAAC AGAGATGGAT TGTTCGTTCT AAGAGGAGGA GACATTCTTC ACTGTGCTGC TACTAAAGTT TTTGCATTTT ATGCAAAGCG AAACGATGAC AAACGAATAT TCTACTGTGA TATTGATTCG ATAGATTGTA AAGGCGAGCG ACATCTCGCA GAGTTTTTCC CTGCTTGGAA CCCAGATCTA CAACTTACTA CTGGTTACAT TAGAACTGGA GTGCTGATTC AAAAATCGAC CGATATCCAT AATTTTTTGC ACTTCGTCAT TGATAATCAA GATGCAAGTG CTTTAGCACT TTGGCTTGCA GATTATTATC TTAGAGAAGT TAAACTCAGT ATTGAGCACA TACCACTGTG TCTGGTGCAT CAAACTTTTA AATATTCTTT GCAATGGGAT AGGGAGCTAC GCAAGCTGAA TAATGAACAG TTTATTGTGA CCAAAGCTGA GGTGATTGGT CTTGCCAAGG TCGAGTGGTA CAAAGAAACA CAACCTTTAG TCAGTTTGGT CATTCCGACC AAAAATGCAA AGAACTTAGT GCAGATGTGT ATTTCATCAA TATTGTCAAA AACCAGCTAT CAGAACTTCG AAATTTTATT GATAGATAAT AATTCAGATG ATCCAGAGGC TTTAGCTTAT TTTGATAAAC TGGTTGATTC AGAAGATAAG GTTAGATTAC TCCGTTATCC ACATGAGTTT AATTATTCAG CCATTAACAA TTTTGCCGTG GCTCACGCCA AAGGTGAAAT AGTGGGGTTG ATTAATAATG ATATTGAAGT CATTAGTGCA AATTGGCTTA CAGATATGGT TGGCCACACT CTTAGAGCTG ATATTGGCTG TGTGGGGGCA AAACTGTTAT ATCCTGATAT GCGTATTCAG CACGCGGGTG TAGTAATGGG TTATGGGGGG GGGGCAGGCC ATGCACATAA ATACTTCCCC CGCTATCACC CTGGTTATTT AAATCGCCTT GCCGTGACTA ATAATTTTAG TGCAGTGACA GCTGCCTGTC TTTTAGTCAA AAAGTCAGAC TTCGATGCTG TTGGGGGGCT AAACCAAGAC GACCTTACAG TTGCCTTCAA CGATGTTGAT TTCTGCCTAA GGATCAGGGA GCTTGGACGT CAAAATCTCT ATTGTGCTGA GGCTGAACTT TTTCATCACG AGTCTATATC AAGAGGGGCT GATGACACAC TAGAGAAGAG ACAACGTTTT GAGAATGAGT TGGATTATTT ACAGCGTAAA TGGCCTGAGT TAATTAAGAA TGATCCTGCT TATAATCCGA ATCTAACGCT TAGGTTTGAA AATTTTTCTA TTAGAGAATG A
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Protein sequence | MWLVKYVVGL FPEKTRKHMR QQLWLFNLYS RSLQKSGLFY GFPSPLKLQK LYCKAIVKQA IEMADICENK FADEKLSTLV TLSGQVDADR NTLSSLITNS AVSAIYLQGQ SADVSRLLEE FSHSSTKELG ALDDLIKSEN RDGLFVLRGG DILHCAATKV FAFYAKRNDD KRIFYCDIDS IDCKGERHLA EFFPAWNPDL QLTTGYIRTG VLIQKSTDIH NFLHFVIDNQ DASALALWLA DYYLREVKLS IEHIPLCLVH QTFKYSLQWD RELRKLNNEQ FIVTKAEVIG LAKVEWYKET QPLVSLVIPT KNAKNLVQMC ISSILSKTSY QNFEILLIDN NSDDPEALAY FDKLVDSEDK VRLLRYPHEF NYSAINNFAV AHAKGEIVGL INNDIEVISA NWLTDMVGHT LRADIGCVGA KLLYPDMRIQ HAGVVMGYGG GAGHAHKYFP RYHPGYLNRL AVTNNFSAVT AACLLVKKSD FDAVGGLNQD DLTVAFNDVD FCLRIRELGR QNLYCAEAEL FHHESISRGA DDTLEKRQRF ENELDYLQRK WPELIKNDPA YNPNLTLRFE NFSIRE
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