Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3198 |
Symbol | |
ID | 4174975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3840613 |
End bp | 3840921 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638056229 |
Product | helix-hairpin-helix repeat-containing competence protein ComEA |
Protein accession | YP_662758 |
Protein GI | 109899503 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGT TTATCGCTAC CCTATTTTTT GCAGGTGTTT TATTGTCTGG TTATGTTGGC AACGTTGTTG CTGAGGCCAA AGTAGACAAA AGCAGTGTCA CACAGAAGAA GTCGCAGAAG ATCAATTTGA ATACGGCAAC AGCCGAGCAG TTAGTCACAT TGCCAGGTAT TGGTAAGAAA AAAGCAGCGG CGATCATCGC CTATCGAGAC AAAAGTGGTA AGTTCGCTAA AATCAGCGAT CTTACTAACG TCAAAGGTAT TGGTAAAAAA ATGGTGGCTA AACTCGCTGC TCACGTACAG GTCAACTAA
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Protein sequence | MKKFIATLFF AGVLLSGYVG NVVAEAKVDK SSVTQKKSQK INLNTATAEQ LVTLPGIGKK KAAAIIAYRD KSGKFAKISD LTNVKGIGKK MVAKLAAHVQ VN
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