| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3183 |
|---|
| Symbol | |
|---|
| ID | 4174960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3828225 |
|---|
| End bp | 3828671 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638056214 |
|---|
| Product | flavodoxin/nitric oxide synthase |
|---|
| Protein accession | YP_662743 |
|---|
| Protein GI | 109899488 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0716] Flavodoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.26856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TAGGTATTTT CGTTGGTTCA GTTTACGGTA ACGCCCAACA TGTTGCAGAG
CAAGTACAAG AGCTGCTCAC CAGTAAACAA GTGGTTAGCG AAATATATGA CGACCCAAGC
ATTGATGATT TTAAACGCTG TGATGGGTAC ATTTTTGTTT CTTCCACTAC GGGGCAGGGG
GATATTCCGC CGAATCTCGA GTTTTTTGTT GCAGATTTAA AGGACATGTT CCCTTTGATG
GATCAGAAGC CGTTTGCTGT CATTGGCTTA GGTGATAGTA GTTACTGTGA TTCGTACTGC
GGGGCGGGCG AGCAAATACA AGCGCTATTA CTTGAGTTAC AAGGCAAGCC AGTTGCAGGT
ATGCTTAAGA TTGATGCTTG TGAAACTCTT GAGCCTGAAA AAGAAGCGTT GGCTTTTATA
GAGCCATTGG CCGCTGAATT TGCGTAA
|
|---|
| Protein sequence | MSKVGIFVGS VYGNAQHVAE QVQELLTSKQ VVSEIYDDPS IDDFKRCDGY IFVSSTTGQG
DIPPNLEFFV ADLKDMFPLM DQKPFAVIGL GDSSYCDSYC GAGEQIQALL LELQGKPVAG
MLKIDACETL EPEKEALAFI EPLAAEFA
|
|---|
| |