| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3180 |
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| Symbol | |
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| ID | 4174957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3823878 |
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| End bp | 3825449 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056211 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_662740 |
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| Protein GI | 109899485 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGAATC GTTTGTTGAA ATCCGGATTG ATTGTCAGTT GTATGACGTT TTTATCACGA
GTCTTGGGTT TGGTCAGAGA TGTTGTGGTG GCGAATTTAA TGGGTGCTGG GGCGGCAGCT
GATGTGTTTT TCTTTGCTAA TAAAATTCCC AATTTTCTTC GTCGTTTATT TGCTGAGGGC
GCATTTGCTC AAGCGTTTAT CCCTGTGCTG ACAGAAGTTA GCAATGAAAA TGACAAAGAT
GCCATGAAGC AATTTATTGC CAAAGTGTCC GGTACGCTTG GAGTAATAGT GACCGTAGTA
ACGTTTCTCG GCGTCATCGG TTCTCCGGTG GTCACTGCGC TGTTTGGCGC CGGCTGGTTT
ATGGAGTATC TCAATGATGA GCCCCAAGGA GCGAAATTCG AGCTGGCAGC CTTGATGTTG
AAGATCACGT TTCCTTATTT AATGTTTATT TCGTTAGCAG GCTTAACCGG CGCCATTTTA
AATACCTTAA ACCAATTTGC TGTGTCCGCA TTCACCCCAG TGCTGTTAAA TGTAGCCATT
ATTAGCTGTG CTATTTTTAT GGCGGATACC TTTGAAGAGC CAGGTTTTGC ATTAGCGTGG
GGAGTATTTA TTGGTGGCAT AGTGCAATTC TCATTTCAGC TACCTTTCTT GTACCGAGCT
GGATTACTGG TAAAACCGCA ATGGGGATGG TCAGACCCAC AAGTAACTAA AGTGCGTAAA
TTGATGATAC CGGCATTGTT CGGGGTATCG GTTGGCCAGC TTAATTTGTT GTTTGATACC
TTTATCGCAA GCTTCTTAGT CACAGGCTCC ATTAGTTGGC TTTACTACTC TGACCGCTTA
CTGGAATTTC CTTTAGGATT ATTTGGTATT GCTATTGCTA CTGTCATACT GCCGACCTTA
TCGCGTAATC ATGTGACAAA CGATGCCAAG GCGTTTAGTG CCAACATCGA CTGGGCGCTG
CGGATGGTAA GTTTATTAGG AATTCCCGCT GCGGCTGGTT TAATGATCTT AGCGGAGCCT
ATGTTGATCG TATTGTTTAA ACGCGGTGAA TTTACCGCAT TAGACGCCAC TCTCGCCTCG
TACAGCTTAA TCGCCTATGC CACTGGATTA CTTAGCTTTA TGTTAATTAA GGTACTTGCT
CCGGGATTTT TCTCTCGTCA AGATACTAAA ACACCGGTGA AGTACGGTAT TTGGTGCATG
GCGTCGAATA TGGTGTTTAA CTTAATTTTC GCTATTCCAT TCGGGTACCT CGGATTGGCG
ATAGCCACTA GTTTGTCAGC CACCATGAAC GCGGGCTTGT TATACAGCAA GTTGCATCGT
TTAGGGGTCT ACAAACTCTC TGCGAGTACC CTGTTGTTCT TAACAAAAGT CTTAATTTCG
ACCTTAATCA TGGCTGCTGG GCTTATCTAT TACCGACCGA CGATTGCTAA TTGGCTGATG
TGGGAGCCGA TGATGCAAAT GACACAATTG GCCATCATGA TAGCGGGAGC TGGGGCGGTG
TTTTTATTGA GTGGATTTGC CCTCGGGATA CGCCCAAAAC AGTTACTATC AAAAGCAATT
CACGTTAATT GA
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| Protein sequence | MSNRLLKSGL IVSCMTFLSR VLGLVRDVVV ANLMGAGAAA DVFFFANKIP NFLRRLFAEG
AFAQAFIPVL TEVSNENDKD AMKQFIAKVS GTLGVIVTVV TFLGVIGSPV VTALFGAGWF
MEYLNDEPQG AKFELAALML KITFPYLMFI SLAGLTGAIL NTLNQFAVSA FTPVLLNVAI
ISCAIFMADT FEEPGFALAW GVFIGGIVQF SFQLPFLYRA GLLVKPQWGW SDPQVTKVRK
LMIPALFGVS VGQLNLLFDT FIASFLVTGS ISWLYYSDRL LEFPLGLFGI AIATVILPTL
SRNHVTNDAK AFSANIDWAL RMVSLLGIPA AAGLMILAEP MLIVLFKRGE FTALDATLAS
YSLIAYATGL LSFMLIKVLA PGFFSRQDTK TPVKYGIWCM ASNMVFNLIF AIPFGYLGLA
IATSLSATMN AGLLYSKLHR LGVYKLSAST LLFLTKVLIS TLIMAAGLIY YRPTIANWLM
WEPMMQMTQL AIMIAGAGAV FLLSGFALGI RPKQLLSKAI HVN
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