| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3179 |
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| Symbol | |
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| ID | 4174956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3822756 |
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| End bp | 3823682 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056210 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | YP_662739 |
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| Protein GI | 109899484 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.422669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAATTAG TCCGCGGTTT ACATAATCTT CGAGATAAAC ATCGAGGATG CGTACTGACA
ATTGGAAAGT TTGACGGCGT TCATCTGGGG CATCAAGCCG TGTTAAGTCA AGTCGTTGTG
AAGGCAAGGG AACTGGGCTT GCCTGCTACC GTTATGGTGT TTGAACCTCA GCCTGAGGAA
TTATTTACAC CGGATAACGC ACCCGCGCGA CTCAGTTTAT TACGTGATAA ATATGTACAA
CTTAAAGCAC TAGGTGTAGA CCGTTTATTG TGTTTGAAGT TTGATAAACG TTTTGCCTCT
TTTACCGCAG AGCAGTTTGT TGAGCAGCTA TTAGTTAAAG ACTTAGGTGT GCAATTTTTA
GTCGTGGGCG ATGACTTTCG CTTTGGCAAA GGGCGAGTAG GTAATTTCGC TATGCTGCAA
GTTGAAGGGC GAAAATGCGG TTTTAGTGTG GTGAGTACGC AAAGCTTTCG CTTAGAAGAT
TGCCGTATTA GCTCGACCGA AGTCCGCAAT GCACTGAGTG AAAACAACTT TTCGCTTGCT
GAAAAGATGC TTGGCAGACC GTTTACGATT TCGGGCAAGG TACTGCATGG TGATAAAAAA
GGCCGCACGA TTGGCTTTCC TACTGCCAAC CTATTGCTGA AACGCTGTAA TGCCCCCATT
AATGGTGTGT TTGCGGTTCA AGTTGACATA GCAGGTAAGG CATATAGTGG CGTGGCGAAC
ATTGGCACGC GCCCAACGGT AAATGGCCAA CGTTCTCAGT TAGAAGTGCA TATTTTTCAT
TTTACCGGCA ACCTATATGG TCACTTTATT TCTGTGGCCA TAAAAGCAAA ATTACGCAAC
GAAATTAAGT TCGATTCGTT CGAACAGTTG CACCAACAAA TACAACGTGA CGCCGAGCAA
GCAAAACAAT TGCTTGGGGT TAACTGA
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| Protein sequence | MELVRGLHNL RDKHRGCVLT IGKFDGVHLG HQAVLSQVVV KARELGLPAT VMVFEPQPEE
LFTPDNAPAR LSLLRDKYVQ LKALGVDRLL CLKFDKRFAS FTAEQFVEQL LVKDLGVQFL
VVGDDFRFGK GRVGNFAMLQ VEGRKCGFSV VSTQSFRLED CRISSTEVRN ALSENNFSLA
EKMLGRPFTI SGKVLHGDKK GRTIGFPTAN LLLKRCNAPI NGVFAVQVDI AGKAYSGVAN
IGTRPTVNGQ RSQLEVHIFH FTGNLYGHFI SVAIKAKLRN EIKFDSFEQL HQQIQRDAEQ
AKQLLGVN
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