| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3153 |
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| Symbol | |
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| ID | 4174930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3796856 |
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| End bp | 3797857 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056184 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_662713 |
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| Protein GI | 109899458 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000122027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTTTAT CTTTTTCTAG CATTGGTCAG TCAGTCGAAG ACGACCAAAA TACAGTGTCT
GTAGACCTTC CAGCGTCATC CCACAGTGAA CCTGCTAAAG CTTTTCCGTC TGATAGCGCC
CATGGCTGGC TCGAAAAGAT GTCTCATGCC CACAGTAACC TGAACTACAG TATTTCATTT
GTACTGCTCA AGCCCGGCGT TGACTCTCAA CCCTACTTAT GGCGTCACGG TGTAAGTGCT
AGCGGTGTCA AAATGGAGCA ACTGAATTTA CTCAATGGCC CGGGTAGGGA AGTCGTGCGA
ATCGACGATA AAGTAAGTTA CTTTGAGCCA AATGTTCCAC CATATAGTTT GCAATCAAGG
GTTATCAATG GGCCATTTCC CAGTGAGTTT TTCCAACAGC CTGATGAAAT CAAAGACAGC
TACGATTTTG TTATGGTGGG TCGTAGCAGA GTATCTGGAC GAGCCGCCCA GCAAATTCGC
ATTGTTAGTA AAGATAAATC TAGATTTGGC ATGAATGTCT GGCTTGACCA AGAAACCGGC
CTGATGCTTA AAATGAACTT AGTGGATTTA AACGGCCAGT TACTAGAACA AATACAAGTG
ACAGCATGTC ACGTCACAGA GCAGCCTGAT GATTTTTTTG AAAAAATTGA ACCTGCTATG
TTACCAGAGG TATTAAAGTT AAGGCCGCAA ACGCATACTA AAGCGATTTG GGATATTGCC
TATGTGCCTG TTGGCATGGT TGAGGTTAAA CGTGATATTC ATCGTTTGCC AATTACAGGG
CAATCTGTTG AATATGTTAT GTTGAGCGAT GGCCTTGTAG ATGTATCTAT ATACATGCGT
GAAAGCCAAA ACGATGGAAT AAACCAAGAT ATTTTGCTGC GCCACGAATC AGATACCTTA
CTCACCCTAA ACCAGGGGAG GCTGAATGTG ACTGTAGTGG GTAAGCTTCC CCCTGAAACA
GCTAATCATA TTGCCAGTTC CATCCACTTA GCCACTAATT GA
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| Protein sequence | MSLSFSSIGQ SVEDDQNTVS VDLPASSHSE PAKAFPSDSA HGWLEKMSHA HSNLNYSISF
VLLKPGVDSQ PYLWRHGVSA SGVKMEQLNL LNGPGREVVR IDDKVSYFEP NVPPYSLQSR
VINGPFPSEF FQQPDEIKDS YDFVMVGRSR VSGRAAQQIR IVSKDKSRFG MNVWLDQETG
LMLKMNLVDL NGQLLEQIQV TACHVTEQPD DFFEKIEPAM LPEVLKLRPQ THTKAIWDIA
YVPVGMVEVK RDIHRLPITG QSVEYVMLSD GLVDVSIYMR ESQNDGINQD ILLRHESDTL
LTLNQGRLNV TVVGKLPPET ANHIASSIHL ATN
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