| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3152 |
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| Symbol | |
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| ID | 4174929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3796351 |
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| End bp | 3796854 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056183 |
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| Product | positive regulator of sigma E, RseC/MucC |
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| Protein accession | YP_662712 |
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| Protein GI | 109899457 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3086] Positive regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000405546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGAAG AAGTTGGCAC TGTCATTGAC GTCCAAATGC GTCATGAACA TCAATTTATT
AAAATCGCTA CTCAGGTAAA ATCTACCTGT GGCAGTTGTC ATGCAAAAGA CAATTGCGGC
ACGGGTGTGA TTGCCCGAGC GCTAGCCAAT AAACGTGACG CGCTATGGTT ACCGTGTGAG
GAATCAGTCG CTGTAGGGCA AGATGTTAAA CTAGGCATTC CTGAATCTAT GCTGCTAAGT
GCTTCGTTGC TCGTTTATAT GCTGCCGCTT TTGACCATGA TTGTCGTGGC AACCACTAGT
ACTTTATTGC TATCAAGCTA CTCAATTGAG GGCGAAGGTT GGGTGATTTT ATCTTCCATG
GTCGCTGCCG TTGTCAGTTT TTTAGGCGTG AAACGCTATA TTTCAGGCAG CACTAAAACG
CAGTTTGAAC CCCATCTTTT AGCCGTCTTA CCTAGCCTGA AAACCCGAGT TGACTGTATT
GATGTAAACA TCATTGAGCC TTAA
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| Protein sequence | MIEEVGTVID VQMRHEHQFI KIATQVKSTC GSCHAKDNCG TGVIARALAN KRDALWLPCE
ESVAVGQDVK LGIPESMLLS ASLLVYMLPL LTMIVVATTS TLLLSSYSIE GEGWVILSSM
VAAVVSFLGV KRYISGSTKT QFEPHLLAVL PSLKTRVDCI DVNIIEP
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