| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3137 |
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| Symbol | tig |
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| ID | 4174910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3780448 |
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| End bp | 3781758 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638056164 |
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| Product | trigger factor |
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| Protein accession | YP_662697 |
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| Protein GI | 109899442 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000644844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTTT CCGTTGAGAC GACTCAAGGT TTAGAACGCC GTCTTACCAT CACTGTTCCT
GCAGAATCAA TTGATTCACA GGTTAAGTCT CGCTTACAAC AGTTAGCTAA GACCCAACGT
ATTAATGGTT TTCGCCCAGG TAAAGTTCCA GTAAGCGTTA TTAAAAAACG TTATGGTCAA
GCCGTACGTC AAGAGATTGC TGGCGAAGCT ATGCAGCGCA ACTTCTATGA AGCAATCGTT
CAAGAAAAAA TTACGCCAGC AGGCATGCCT AACTTCGAAA TGAAGACAGA CGTTGACGGA
CAAGACTTAG AGTTTGTTGC TGCGTTTGAA GTTTATCCTG AAGTGGAAGT GAAAGACGTT
GAGAAAATCG AAGTAGAGAA GCCAGTGGTA GAAATTACTG ATGCTGATCT TGAAACGATG
ATGGAAACGT TGCGTAAACA GCACGCTACT TGGAAAGAAG TAAAGCGTAA GTCTAAGAAA
GATGACCGCG TGACGGTGGA TTTCGTTGGT ACTATTGACG GTGAAGAGTT TGAAGGCGGT
AAAGCTGAAA ACTTTGAGCT CGAAATGGGC AAAGATCGTA TGATCCCTGG TTTTGAAAAG
CCAATCGTTG GCGCTAAAGC TGGCGAAGAA GTTGTTGCTG ACGTGACCTT CCCTGAAGAT
TACCATGCAG AAGCACTTAA GGGTAAAGAA GCCCAATTCA AAATTACTGT TAACAAAGTA
GAAGGTCTGA GCCTTCCTAA AGTTGACGAA GAGTTTGCTA AATTGTTTGG TGTAGAAGAC
GGCGACGTTG AAGCACTTAA TGCTGAAGTA CGTAAAAACA TGCAACGTGA GCTTGAGCAA
ACGTTGAAAG CTAACGTAAA AGAGCAAGTT ATCGAAGGTT TGTTGGCAAA CAACGAAATT
GACTTGCCTA AAGCATTGGT TGATCAAGAA ATTAACGCCC TACGTGAGCA AGCTAAGCAG
CGCTTCAGCC AGCAACAAGG TGGTAATGTT GATAATCTTC CTGAGCTTCC AGCTGACTTG
TTCCAAGAAA ACGCACGTAA GCGTGTTTCA ATTGGCTTGT TGCTTGGCGA AATCATCAAA
ACTGAAGAGT TGAAAGTAGA CTCTGCTAAG GTTGATGCAT TGATCGAAAC AGCTGCTTCA
GCGTACGAAG ATCCTCAAGA AGTGATCGAG TACTACAAAA CTAATGACGA ATTGATGCAG
CAAATGCAAA ATGTCGCGTT AGAAGAGCAA GCTGTTGAAG TGCTTCTTAG CAAAGCAAAT
GTGAAAGAAG TAAACAAAGC TTTTGATGAG ATCATGAACA AACAGGCGTA A
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| Protein sequence | MQVSVETTQG LERRLTITVP AESIDSQVKS RLQQLAKTQR INGFRPGKVP VSVIKKRYGQ
AVRQEIAGEA MQRNFYEAIV QEKITPAGMP NFEMKTDVDG QDLEFVAAFE VYPEVEVKDV
EKIEVEKPVV EITDADLETM METLRKQHAT WKEVKRKSKK DDRVTVDFVG TIDGEEFEGG
KAENFELEMG KDRMIPGFEK PIVGAKAGEE VVADVTFPED YHAEALKGKE AQFKITVNKV
EGLSLPKVDE EFAKLFGVED GDVEALNAEV RKNMQRELEQ TLKANVKEQV IEGLLANNEI
DLPKALVDQE INALREQAKQ RFSQQQGGNV DNLPELPADL FQENARKRVS IGLLLGEIIK
TEELKVDSAK VDALIETAAS AYEDPQEVIE YYKTNDELMQ QMQNVALEEQ AVEVLLSKAN
VKEVNKAFDE IMNKQA
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